Coregonus clupeaformis (lake whitefish): 121553540
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Entry
121553540 CDS
T08357
Name
(RefSeq) neuroblast differentiation-associated protein AHNAK
KO
K23934
neuroblast differentiation-associated protein AHNAK
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
121553540
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Gene cluster
GFIT
Motif
Pfam:
LmeA
DUF4097
Motif
Other DBs
NCBI-GeneID:
121553540
NCBI-ProteinID:
XP_041722658
LinkDB
All DBs
Position
37:29287279..29298002
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AA seq
1679 aa
AA seq
DB search
MNGKSRQRRYSESLVLEDSDRGGVVITGITDPSVTHKSGLKEGDEIVAATIHLNHLSKDD
LMEILKIMEPYEDNMSFVTKPGLKASASLGSLDGGLKSPGDMLKDTYSRMQRAVEAPSIE
VVGLSGQLNAEGRLNNEINGPTLNGKLPNVTLDTPGTDGGAKFPMPTIGMSGPVMKGADQ
EGTLRGPKVSLSTPELSTSDASLDLEKPAVKTSGLKYKHPKFKMPHFKPPHIKAKAPKGD
VNVSADLEGPGLSGELETRDLTLSAPDVEIKCPDVDLNGPNADLKAPDVDIEAPSGKFKW
LTLTKPKFRLSGPKVKGPEVDIDADLSAPDNLSTPNIDGEISAPDVDLSLPKAEVDLQAP
DIDIEAPSSKFKWPHLKKHKFGLHGPKVNPPGVDFKADLETPTVDLSVPKIEAEMSNPDL
ELNLPKADLSSPEVDVKVPDVDIHSPTGKLKFPKLKKPNFRLSGPNIKAPDIDVDADLKA
PDLSLSVPEVEAGLNMPDLHTNLPNDIKGPEVDLNASEVDIEPPSGKLKLLTLKKPKFHL
SGPKAKGPKDFNLSTPNIDGEIHAPDVDLNLPKADLEGPVVDVDIDAPSGKVKWFNLKKP
TADLKGPDVDLQAPEVDIKTPSGKHRFPTLKMPTINWTGHKVKGPKLDADLKRADLDRPA
PVVDVNLPGADLQGLDLNLSAPAITADIDVPDVDLQAPEVNVEAPTGKHRFRTLKMPKIN
WSGHKVKGPNLDIDADLKKADLDLSAPEVDVNLPEADLQGPDLNLSAPAIEGDIAVPDIN
VSLPEADLKGPDVDLDLDAPSGKFKLPKLKWPKIRKVKGPELDVDADLKTPELDVDVNLP
EADLKGPRLDLKTTDLNLSAPAIEEDFTVPDLNISLPKVDHDAPSGTLKLPKYNPPKFSL
TGPRVKGPNLDAELKAPKLDVSVPDVDVSLPTADCQAPVVELKTPDLSAPKIKGSMAAPG
LSTSLPEAGIKGPAVDLKAPEVDHDAPSGTFKLPKFKLPKSSLTGPRVKGPNLDAELKAP
KLDVSVPDVDVSLPTADCQAPVVELKTPDLSAPKIKGSMAAPGLSTSLPEAGIKGPAVDL
KAPEVDHDAPSGTFKLPKFKLPKSSLTGPRVKGPNLDAELKAPKLDVSVPDVDVSLPTAD
LQASVVELKTPDLDLSDPKSKVVLEGLDVDLQAPDVDLNASVDLNVDADLKTPNFAISAP
KADVNLPEVDLQGPGLDLKALEPNRSAPKLEGEVNVPEIRINVPKPDLKGPAVDLKAPDV
DIDAPSGKFKLPHFKLPTFGLSGSKLKGPKRDIDTPDINISVPRVETRLETPKVDLAVPQ
AYLNLSDPNVKSYISAPDVNLSLPKTDYSGPEVELNGPDLSLSTPGIEVSVPDIKGPEVE
LKAPDVDIAAPSGKLPHYKMPKFGLSGPRRKGTEYNASADVNIPDVEVLFPKVEGEISTP
ELSLSAPGIEASADMPDLDVNLPEADLKVDVEEEGDTHKSTFKWPFKSPSFKSSGSKGKD
SDMDDEEEQSRNESKSDQVEVPMFTFHRLPQTNKIESAFQDAAKALGEAIDTQKLDGGLE
TAGTEVSLPKVNEGQKVTSPSGLINIMERLKRFKAKTPTANVSLPEVKGELRAPSLNVRS
TSDADSSTLLKRGTFKVTKPKSGVGLEYPVVDSSEGNDIISISLSNMLGLNIKEPDADY
NT seq
5040 nt
NT seq
+upstream
nt +downstream
nt
atgaatgggaaaagtcggcaaagacgttactccgaaagcttggtcctggaggattcagac
agaggaggagttgtcatcactggaatcacagaccctagtgtcactcataagagtggcttg
aaagaaggcgatgagattgttgctgccaccatacatcttaaccacctcagtaaagatgac
ctgatggaaatactcaagatcatggagccttacgaagacaacatgagttttgtgacaaag
cctggtctgaaagccagcgccagtctcggctcattggacggtggtctcaaaagtcccggg
gatatgctcaaagatacctacagcagaatgcagcgagcagttgaggcaccatctattgag
gttgttggcctcagtggacaattaaatgcagaaggcaggttgaataatgaaatcaatggt
cccactttgaatgggaaattgcccaatgtgaccttggacacacctggaactgatggaggt
gcaaagtttccaatgcccaccattggaatgtctgggcctgtaatgaaaggagcagatcag
gagggcaccctcagaggccctaaagtcagtctatcaacaccagagctcagcacttcagat
gcttcacttgacttggagaaaccagcggttaagacgagtggattgaagtacaagcatcca
aaattcaaaatgcctcacttcaaaccaccacacataaaagccaaagcgccaaagggagac
gtgaatgtatcagcagatttagaaggccctggtctcagtggagagctagagacacgagac
ctgaccctctcagcccctgatgtggaaatcaaatgcccagatgtagatttgaatgggcca
aatgctgacttgaaagctccagatgttgacattgaggctccatcaggcaaattcaaatgg
cttactctcacaaagcccaagttcagattatctggaccaaaagtgaagggacctgaagtg
gacatagatgctgacctgtctgcacctgacaatctctccactcccaacattgatggagag
ataagcgcaccagatgtagacctgagtttaccaaaagctgaggtagatctgcaagctcca
gatatcgacattgaggctccctcaagtaaattcaaatggcctcatttaaagaaacacaaa
tttggtcttcatgggcccaaagtcaacccccctggtgtggattttaaggcagatctggag
acaccaactgttgatctttctgtcccaaaaattgaggctgagatgagcaacccagattta
gaattgaatttacccaaagcagacctcagtagccctgaggtagatgtaaaagtccctgat
gttgacattcattctcccactgggaaacttaagttcccaaaactcaaaaagccaaatttc
aggctctctggaccaaatataaaagctccagacattgatgttgatgcagatctgaaagca
cctgacctcagtctctctgtccctgaagttgaggcagggcttaacatgcctgatttgcac
accaatttgccaaatgatatcaaaggccctgaagtagacctgaacgcatcagaagtggac
attgagcccccttcagggaaattgaaattgcttactctaaaaaagcccaagtttcatctc
tctggacccaaggctaagggtcccaaagacttcaatctctccactccaaatattgatgga
gaaatacatgcaccagatgtagatcttaatttacccaaagctgaccttgaaggcccagtg
gtagatgttgacattgatgcaccctctggaaaagtcaagtggttcaacctaaagaagccc
acagctgatttgaaaggtccagatgtagatcttcaggcaccagaggtcgacattaagaca
ccctctggtaagcatagatttccaactttaaaaatgcccacaattaactggactggacat
aaggtgaagggaccaaagcttgatgctgatctgaagagagcagatttggaccgaccagct
cccgtggttgatgtgaatttaccaggagcagatctccaaggccttgatcttaacctctcc
gcaccagcaattacagcagatattgatgttccagatgtagatcttcaggcaccagaagtc
aacgttgaggcacccactggaaagcatagatttcgaactttaaaaatgcccaaaattaac
tggtctggacataaggtgaagggaccaaaccttgatattgatgctgatctgaagaaagca
gatttggacctctcagctccggaggttgatgtgaatttaccagaagcagatctccaaggc
cctgatctcaacctctcagcaccagcaattgaaggagacatcgctgttccagatatcaat
gtcagtttgcctgaagctgacctcaaaggaccagatgtagatttagaccttgatgctccc
tctggaaaattcaagttgccgaaactaaaatggccaaaaataagaaaagtaaaaggaccg
gaacttgatgtagatgctgatcttaagaccccagaattagatgttgatgttaatttacct
gaagcagatctgaaagggcctcgtctcgacttgaaaacaacagatctcaacctctcagca
ccagcaattgaggaagactttactgttccagatttgaatatcagtttgcctaaagttgac
catgatgctccctctggaacattgaagttaccaaaatacaaccccccaaaattcagttta
acaggaccaagagttaaaggaccaaaccttgatgctgagctaaaggccccaaaattggat
gtctctgttcctgatgtggatgtcagtttgccaacagctgactgccaagcccctgtagta
gagctgaaaacaccagacctttctgcccccaaaatcaagggatctatggctgctccaggt
ttgagtaccagtttgcctgaagctggcattaaaggtccagcggtggatcttaaagcccca
gaagttgaccatgatgccccatctggaaccttcaagttgcccaaattcaaactccccaaa
tccagtttaacaggaccaagagttaaaggaccaaaccttgatgctgagctaaaggcccca
aaattggatgtctctgttcctgatgtggatgtcagtttgccaacagctgactgccaagcc
cctgtagtagagctgaaaacaccagacctttctgcccccaaaatcaagggatctatggct
gctccaggtttgagtaccagtttgcctgaagctggcattaaaggtccagcggtggatctt
aaagccccagaagttgaccatgatgccccatctggaaccttcaagttgcccaaattcaaa
ctccccaaatccagtttaacaggaccaagagttaaaggaccaaaccttgatgctgagcta
aaggccccaaaattggatgtctctgttcctgatgtggatgtcagtttaccgacagctgac
ctccaagcctctgtagtagagctgaaaacaccagacctggacctttctgaccccaaaagt
aaagtggtccttgaaggactagatgtagatctccaagccccagatgttgatcttaatgct
tctgttgaccttaatgttgatgctgatctgaagacaccaaattttgccatctccgctcct
aaggctgatgtgaatttaccagaagtagatctccaaggtcctggtctagacctgaaagca
ctagagcccaaccgttctgcccccaaacttgagggtgaagtgaatgtaccagagataaga
atcaatgtacccaaacctgacctcaaaggacctgcagtagatctaaaagctccagatgta
gacattgatgccccttcaggcaaattcaaattgcctcattttaaactccccacatttggc
ctttcaggttctaaactgaagggaccaaaacgtgacattgatacacctgacattaatatt
tcagttcccagagttgagactcggcttgaaaccccaaaggtagatttagctgtacctcaa
gcatacctcaatctatctgatcctaatgttaaaagttatattagtgctccagatgtaaat
ctaagtttaccaaaaacggactactctggccctgaggttgagttgaatggtcctgatcta
agtctctctaccccaggaattgaagtaagtgtcccagacattaaaggccctgaggttgag
ttgaaagctccagatgttgacattgcggctccctctggaaaactgcctcattataagatg
ccaaagtttggtctctcaggacctagaagaaagggaacagaatataatgctagtgcagat
gtaaatatacctgatgtggaagttttattccccaaagttgagggagagattagtacacct
gaactgagtctctctgctcctggcattgaggccagtgctgacatgccagatttggatgta
aatttaccagaagctgacctcaaagtagatgttgaggaagagggagacactcacaaaagt
acgttcaaatggccattcaagtcgccaagctttaaatcatctggctcaaaaggtaaagat
tctgacatggacgatgaggaagaacagagtaggaatgaatcaaagagtgatcaggtagag
gtaccaatgtttacctttcacagactgccacagaccaacaagattgagagtgcattccaa
gatgctgccaaggcccttggtgaggcgattgacacacaaaagcttgacggaggccttgaa
acagctggcacagaggtcagtttgcctaaagtgaatgaaggacagaaggtgacatcacct
tcaggacttattaacatcatggagcggttgaagagatttaaagcaaaaacacccacagct
aatgtctccctaccagaagtgaaaggtgagctccgtgcccctagccttaatgtcaggtcc
acctcagacgcagacagttccactttgctaaaaagagggactttcaaagttacgaaacct
aaatctggggtaggcctggaataccctgtagtggactcatcggagggaaacgatatcata
tcaataagcctctccaatatgcttggtctgaatatcaaagaacccgatgcagattattga
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