KEGG   Coregonus clupeaformis (lake whitefish): 121553595
Entry
121553595         CDS       T08357                                 
Name
(RefSeq) serum response factor isoform X1
  KO
K04378  serum response factor
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu04010  MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    121553595
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:cclu03000]
    121553595
Transcription factors [BR:cclu03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   MADS-box responders to external signals
    121553595
SSDB
Motif
Pfam: SRF-TF
Other DBs
NCBI-GeneID: 121553595
NCBI-ProteinID: XP_041722772
LinkDB
Position
37:complement(3510667..3574662)
AA seq 590 aa
MLPSQAGSAQSGNGSASVRGNTGHGSGVIGSGIRPMLVRAGQSITGVSDSTGAVGMLGSN
SPGVGARGGARPGNGTGLTTTQTAGQGGIGGLIMGVGVHGGSRYDPDKECAPMGCSGSDA
DSDSGDDEDPMCSIGDNRRGVKRERLEMEAAVTGQEAGVPPGGYGVVPRGVAGAKPGKKT
RGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVLLLVASETGHVYTFATR
KLQPMITSETGKALIQTCLNSPDSPPRNDPSTDQRMSATGFEETDLSYQVSESESLGETK
DQLKPVFTVASLPGTTSTHTPTAPTTSTTMQVSSGPSFPITNYLAPVSSSSNVNGTVLKT
TGASGGQVMQLPSGFTFMSAGTPLPPGTPTIPLSQLHQQSLAISGQRGQTLTASQLTQQG
QQAVFRFPAAVSLGGGMNQQLQAIQVHPATHTNDSSSEISQTSTVSTATIVTSSVPTSMA
GHMMYTSPHTVMYASSDVLNAFSQGPSAMQVSHGQGQDTGETTLDYSRLRWDAGAVPQVF
LTAPSGTMQIPVSAVQLHPMVIGQQSSGSSSNLTELQVVNLDTPQNTKND
NT seq 1773 nt   +upstreamnt  +downstreamnt
atgttaccaagccaggctggatcagcacaatctggaaacgggtcagcgtctgtcaggggt
aacacaggtcacggttctggggtcattgggagtgggattcgccccatgttggtcagagca
gggcaatcgataactggggtcagcgacagcaccggtgcggttgggatgttggggagcaac
agtccaggagtgggtgcaagaggtggggcgagaccagggaacgggacgggactgacgact
acacagaccgccggccagggaggcatcggaggtctgatcatgggagttggggttcacgga
ggcagccggtacgacccggacaaagagtgtgcgccaatggggtgcagtgggtcggacgct
gattcggactcgggggatgatgaagatccgatgtgttcaatcggggacaacagaagagga
gtaaagcgggagagactagagatggaggctgcggtgacagggcaggaggcgggggtacca
ccggggggttatggcgtggtccctcgaggtgttgctggcgcaaagccagggaagaagaca
cgtggacgcgtgaagataaaaatggaatttatcgacaacaagttgaggcgatacacaact
tttagcaagaggaagactggtataatgaagaaggcctatgagctctccacgttgacagga
acccaggtcctgctactggtggccagtgagacgggccatgtctacacgtttgccacgcgg
aagctccagcccatgatcaccagcgagacgggcaaggccctcatccagacgtgcctcaac
tctccggactcgcccccccgcaacgacccctccactgaccagcgtatgagcgccacgggc
ttcgaggagacggacctcagctaccaggtgtctgagtcggagagccttggggagaccaag
gaccagctaaagcctgtgtttacagtggccagcctccccggcaccaccagtacccacaca
cccacggcccccaccacctccaccaccatgcaggtgagcagcggaccctccttccccatc
accaactacctggcacccgtctcttctagcagcaatgtcaacggcacagtcctcaagacc
accggtgcctccggagggcaggtcatgcagctacccagcggctttaccttcatgtcagca
ggcactcctctcccccccggcacccccaccattccgctcagccagctgcaccagcagtcc
ctggccatctcggggcagcggggccagacgctcaccgcatcgcaactgacacagcagggc
cagcaggctgtctttcgattccccgctgcagtctccctagggggagggatgaaccagcag
ctgcaggccatccaggtgcaccccgccacacacaccaacgacagcagctcggagatctcc
cagacctcgactgtctccactgcgaccatcgtcacgtcgtctgtgcccacgtccatggcg
ggtcatatgatgtacaccagcccccacacagtgatgtacgcgtccagtgatgtgctcaac
gccttttcccagggcccctcagccatgcaggtgtcccacggacagggccaggacacaggt
gagacaacgcttgactacagtaggctacgctgggacgcaggtgctgtccctcaggtattc
cttacggcaccctcaggcaccatgcagatcccggtttctgcagtgcagctacacccaatg
gtgattggtcagcagtcgagcggcagcagcagtaacctgacagagctacaggtggtcaac
ctggacaccccacagaacactaagaacgactga

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