Coregonus clupeaformis (lake whitefish): 121553595
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Entry
121553595 CDS
T08357
Name
(RefSeq) serum response factor isoform X1
KO
K04378
serum response factor
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121553595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121553595
Transcription factors [BR:
cclu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box responders to external signals
121553595
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SRF-TF
Motif
Other DBs
NCBI-GeneID:
121553595
NCBI-ProteinID:
XP_041722772
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Position
37:complement(3510667..3574662)
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AA seq
590 aa
AA seq
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MLPSQAGSAQSGNGSASVRGNTGHGSGVIGSGIRPMLVRAGQSITGVSDSTGAVGMLGSN
SPGVGARGGARPGNGTGLTTTQTAGQGGIGGLIMGVGVHGGSRYDPDKECAPMGCSGSDA
DSDSGDDEDPMCSIGDNRRGVKRERLEMEAAVTGQEAGVPPGGYGVVPRGVAGAKPGKKT
RGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVLLLVASETGHVYTFATR
KLQPMITSETGKALIQTCLNSPDSPPRNDPSTDQRMSATGFEETDLSYQVSESESLGETK
DQLKPVFTVASLPGTTSTHTPTAPTTSTTMQVSSGPSFPITNYLAPVSSSSNVNGTVLKT
TGASGGQVMQLPSGFTFMSAGTPLPPGTPTIPLSQLHQQSLAISGQRGQTLTASQLTQQG
QQAVFRFPAAVSLGGGMNQQLQAIQVHPATHTNDSSSEISQTSTVSTATIVTSSVPTSMA
GHMMYTSPHTVMYASSDVLNAFSQGPSAMQVSHGQGQDTGETTLDYSRLRWDAGAVPQVF
LTAPSGTMQIPVSAVQLHPMVIGQQSSGSSSNLTELQVVNLDTPQNTKND
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgttaccaagccaggctggatcagcacaatctggaaacgggtcagcgtctgtcaggggt
aacacaggtcacggttctggggtcattgggagtgggattcgccccatgttggtcagagca
gggcaatcgataactggggtcagcgacagcaccggtgcggttgggatgttggggagcaac
agtccaggagtgggtgcaagaggtggggcgagaccagggaacgggacgggactgacgact
acacagaccgccggccagggaggcatcggaggtctgatcatgggagttggggttcacgga
ggcagccggtacgacccggacaaagagtgtgcgccaatggggtgcagtgggtcggacgct
gattcggactcgggggatgatgaagatccgatgtgttcaatcggggacaacagaagagga
gtaaagcgggagagactagagatggaggctgcggtgacagggcaggaggcgggggtacca
ccggggggttatggcgtggtccctcgaggtgttgctggcgcaaagccagggaagaagaca
cgtggacgcgtgaagataaaaatggaatttatcgacaacaagttgaggcgatacacaact
tttagcaagaggaagactggtataatgaagaaggcctatgagctctccacgttgacagga
acccaggtcctgctactggtggccagtgagacgggccatgtctacacgtttgccacgcgg
aagctccagcccatgatcaccagcgagacgggcaaggccctcatccagacgtgcctcaac
tctccggactcgcccccccgcaacgacccctccactgaccagcgtatgagcgccacgggc
ttcgaggagacggacctcagctaccaggtgtctgagtcggagagccttggggagaccaag
gaccagctaaagcctgtgtttacagtggccagcctccccggcaccaccagtacccacaca
cccacggcccccaccacctccaccaccatgcaggtgagcagcggaccctccttccccatc
accaactacctggcacccgtctcttctagcagcaatgtcaacggcacagtcctcaagacc
accggtgcctccggagggcaggtcatgcagctacccagcggctttaccttcatgtcagca
ggcactcctctcccccccggcacccccaccattccgctcagccagctgcaccagcagtcc
ctggccatctcggggcagcggggccagacgctcaccgcatcgcaactgacacagcagggc
cagcaggctgtctttcgattccccgctgcagtctccctagggggagggatgaaccagcag
ctgcaggccatccaggtgcaccccgccacacacaccaacgacagcagctcggagatctcc
cagacctcgactgtctccactgcgaccatcgtcacgtcgtctgtgcccacgtccatggcg
ggtcatatgatgtacaccagcccccacacagtgatgtacgcgtccagtgatgtgctcaac
gccttttcccagggcccctcagccatgcaggtgtcccacggacagggccaggacacaggt
gagacaacgcttgactacagtaggctacgctgggacgcaggtgctgtccctcaggtattc
cttacggcaccctcaggcaccatgcagatcccggtttctgcagtgcagctacacccaatg
gtgattggtcagcagtcgagcggcagcagcagtaacctgacagagctacaggtggtcaac
ctggacaccccacagaacactaagaacgactga
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