Coregonus clupeaformis (lake whitefish): 121553624
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Entry
121553624 CDS
T08357
Name
(RefSeq) A disintegrin and metalloproteinase with thrombospondin motifs 5
KO
K08620
a disintegrin and metalloproteinase with thrombospondin motifs 5 [EC:3.4.24.-]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cclu01002
]
121553624
Peptidases and inhibitors [BR:
cclu01002
]
Metallo peptidases
Family M12: astacin/adamalysin family
121553624
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADAMTS_spacer1
ADAMTS_CR_2
Reprolysin
TSP1_ADAMTS
TSP_1
ADAMTS_CR_3
Reprolysin_3
TSP1_spondin
Reprolysin_5
Reprolysin_2
Reprolysin_4
Peptidase_M10
TSP1_CFP_C
DUF4953
Astacin
Peptidase_M54
Motif
Other DBs
NCBI-GeneID:
121553624
NCBI-ProteinID:
XP_045072883
LinkDB
All DBs
Position
Unknown
AA seq
598 aa
AA seq
DB search
DLCGHHSCDTLGMADVGTICSPERSCAVIEDDGLHAAFTVAHEIGHLLGLSHDDSKFCEE
RFGASADKRLMSSILTSIDASKPWSRCTSATITDFFDDGNAECLLDTPRQPMLGSEELPG
QSYDAVRQCRLAFGPEYTVCPGMDVCARLWCAVIRQGQMVCLTKKLPAVEGTPCGKGRIC
LQGKCVDKTRKRHYSASNHGSWSSWGPWGACSRTCGGGVQFAQRLCNNPPPRNNGRYCTG
KRAIYRSCSVTPCPSHSKSFRQEQCEVRNGPQTDPKGVKTFVEWVPKFAGVLPKDVCKLT
CRAKGTGYYVVFSQRVVDGTECRPYSSSVCVKGKCVRTGCDGIIGSKLQFDKCGICGGDS
TGCIRVIGNFTKKSKGYTDVVKIPEGSTHIKVRQHKPKDQPRYTAYLALRRPGGNYLLNG
KFMISTAETVIPLNGSVLNYSGWSQQDEWLHSMGPGALREALTVQILATDAKRPLDIRYS
FFMPRRVLAPPPPPPPHTSTTTSTTTTTTTTTSTRSSSRTTLAPFSAPALARSTAPGVST
VAPGPQWVTGPWMICSRTCDTGWQSRTVQCKDPQAKLAKGCPLADRPSAFKQCLVKKC
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
gacctgtgtgggcaccactcgtgtgacacactgggcatggccgacgttggcaccatctgc
tcaccagagaggagctgtgccgtcatagaggacgacggactccatgccgccttcacagtg
gcacacgagataggtcacttgctgggcctgtcccacgacgactccaagttctgcgaagag
cgtttcggcgccagcgcggacaagcgtctcatgtcgtccatcctgacctccatcgacgcc
tccaaaccctggagccgctgcacctcagctaccatcactgacttctttgacgatggcaac
gccgagtgtctcctggacactcctcgccagcccatgctcggctcagaggagctgcccggc
cagagctacgacgctgtgcgccagtgccgcctggcgtttgggcctgagtacacagtctgc
ccgggcatggacgtgtgcgcccgcctgtggtgcgcagtgatacgccagggccagatggtg
tgcctgaccaagaagctgcccgccgtggagggcacgccgtgtggcaagggccgcatctgc
ctccagggcaagtgcgtggacaagacccggaagagacactactcggcatctaaccacgga
agttggagttcgtggggtccgtggggggcatgttcgaggacgtgcggtggaggggtgcag
ttcgcccagcgtctgtgtaacaacccgccgccccgaaacaatgggcgctactgcaccggc
aagagagccatctacaggtcctgcagtgtcaccccatgcccctcgcacagtaagagtttc
cgccaggagcagtgtgaggtgcggaatggcccccagacagaccctaagggggtgaagacc
tttgtggagtgggtacccaagttcgcaggagtgctacccaaagatgtgtgcaagctgacc
tgccgggccaagggcacaggctactatgtagtgttctcgcagagggtggtggatgggaca
gaatgtcggccgtacagcagctcagtgtgtgtgaagggcaagtgtgtgcgtaccggctgt
gacggcatcattggctccaagctgcagtttgacaagtgtggcatctgtggaggggacagc
actggctgcatcagggtgataggcaacttcaccaagaagagtaagggctacacagacgtc
gtgaagatcccagagggctccacccacatcaaggtccgccagcacaagcccaaggaccag
cccaggtacacagcctacctggccctgcgtcgtcctggtggtaactacctcctcaatggc
aagtttatgatctctaccgcagagacagtcatccccctcaacggctcggtgctcaactac
agtggctggagccagcaggacgagtggctacacagcatgggcccaggggccctcagagag
gcccttacggttcagattctggccacggatgccaagaggcccctggatatccgctacagc
ttcttcatgccccgtcgggttttggcaccaccacccccacctcccccgcacacctccaca
accacatccaccactactactactacaacaaccacctctactagatccagcagtagaacc
acattggccccgttttcggccccggccctggctcgctccacagctccgggggtgtcgacg
gtggcccctgggccccagtgggtgacgggcccctggatgatctgctccaggacttgtgac
acgggctggcagagccgcacggtgcagtgcaaggacccgcaggccaagctggccaagggg
tgccctctggccgaccgcccctccgccttcaaacaatgcctagtgaaaaagtgttga
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