Coregonus clupeaformis (lake whitefish): 121553654
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Entry
121553654 CDS
T08357
Symbol
vax1
Name
(RefSeq) ventral anterior homeobox 1
KO
K09318
homeobox protein ventral anterior
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121553654 (vax1)
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
121553654 (vax1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
Homez
YdaS_toxin
Motif
Other DBs
NCBI-GeneID:
121553654
NCBI-ProteinID:
XP_041722871
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All DBs
Position
37:29544485..29554124
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AA seq
313 aa
AA seq
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MEVRYNQETDPGMRLKNGIKDGKDSKDSQGNLSKTFLKDQQESFSPSGTVESCEKNRGST
GDPDYCRRILVRDAKGSIREIILPKGLDLDRPKRTRTSFTAEQLYRLEMEFQRCQYVVGR
ERTELARQLNLSETQVKVWFQNRRTKQKKDQGKDSELRSVVSETAATCSVLRLLEQGRLL
TPPGLPGLLQHCGNGTLGAAMRGPSMGMASNGSSSSSGASSGTAGGSPPLPMVTSSGTVA
GLQSSQSAHGLFSFPMPSLLGSVATRMSSNPLSMAGSLAGNLQELSARYLSSSAFEPYSR
TNGKESVDKNVLE
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atggaggtcagatacaaccaagagacagatccagggatgaggctgaagaacggcataaag
gatgggaaagatagcaaggattcccagggaaacctttccaaaaccttcctaaaggatcag
caggagtccttctcgccatctgggacggtggaaagctgtgagaagaaccgggggagcacg
ggcgacccggactactgccggagaatacttgtccgagatgccaaagggtctatccgagag
atcattctgccaaagggactggatttggaccgtcccaaacgaacccggacctctttcact
gcagagcaactctatcgtctggagatggagttccagaggtgccagtatgtggttgggagg
gaacggacagaactggcccgccagctaaatctatctgaaacgcaggttaaagtttggttc
cagaaccgacgcacaaagcagaagaaggaccagggcaaagattcagagctgcgctcggtg
gtgtcggagacggcggccacctgcagtgtattgagactcctggagcagggccggctcctc
acgccgccaggcctgccggggctcctgcagcactgtggcaacggcaccctgggtgccgcc
atgcgagggccctccatgggcatggccagcaacggaagcagcagcagcagtggtgccagc
tcagggacggctggcggcagtccccctctgcccatggtgacgagctcagggacggtggcg
ggtctccagagctcccagtcagctcacggcctgttcagctttcccatgccctctctgctt
ggcagcgtggccacccgcatgtcctccaacccgctctccatggccggctccctggccggg
aacctgcaggaactgtctgcccgctatctgagctcttctgcttttgaaccttactcacgg
accaatggaaaggagagtgtggacaaaaacgttttggaatga
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