Coregonus clupeaformis (lake whitefish): 121553655
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Entry
121553655 CDS
T08357
Symbol
sgpl1
Name
(RefSeq) sphingosine-1-phosphate lyase 1 isoform X2
KO
K01634
sphinganine-1-phosphate aldolase [EC:
4.1.2.27
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu00600
Sphingolipid metabolism
cclu01100
Metabolic pathways
Module
cclu_M00100
Sphingosine degradation
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
121553655 (sgpl1)
Enzymes [BR:
cclu01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.2 Aldehyde-lyases
4.1.2.27 sphinganine-1-phosphate aldolase
121553655 (sgpl1)
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Motif
Pfam:
Pyridoxal_deC
Aminotran_5
Aminotran_1_2
DegT_DnrJ_EryC1
SepSecS
Motif
Other DBs
NCBI-GeneID:
121553655
NCBI-ProteinID:
XP_041722872
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Position
37:complement(6635560..6666050)
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AA seq
570 aa
AA seq
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MDYWSALEVYKEMLLLYLEEGRRLVNTNCEELEPWQIIGATLISTLGAVWVKGFLFQQET
LTSRIKKQCFRLIRKIPFVGATIQTQLNKALADMSLSLCTLKEGMSYTKQLPEQGLTQVE
VLDRIREYQTLNEVDWEKGRVSGAVYWGDQTLTKLLVKVYGDFAWSNPLHPDLFPGVRKM
EAEIVRMACTLFNGGPNSCGTVTSGGTESILMACKAYRDMAYERGVKHPEIIAPVSVHAA
FDKAANYFGMKLVHIPLDKKTMKVDVQAMRRAINKNTAMLVCSAPQFPHGIIDPIEEVGK
LAVKYNLPLHVDACLGGFLIVFMAKANYPLAPFDFRVKGVTSISADTHKYGFAPKGSSVI
LYSDKKYRHYQYFVAPDWQGGIYASPSVAGSRPGGIIAACWATMMYMGEDGYIKTTKKII
DTARTIKTEIRKIDGVFVFGDPEVSVVAIGSDVFDIFRLSNALTSKGWNLNTLQYPSSIH
ICCTVLHTQEGVAKQFISEVKEQVALILKNPNEKTTGMGAIYGMAQSIPDRSMVTEISCG
FLDCLYSTEEPKSSQPQKTHINGNSNGKAH
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atggactattggagtgccttggaggtgtacaaggagatgctattgctctacctggaggaa
ggcaggcggcttgtgaacaccaactgcgaggagctggaaccatggcagatcattggagct
actctcatctcgaccctaggagcagtctgggtcaaaggcttcctgtttcagcaagaaacc
ctgacatcccgaatcaagaagcagtgctttcgactcatcagaaaaataccctttgttggc
gcgacaatccagacccagctgaacaaggccctggctgacatgtctctcagtctttgcaca
ctgaaggagggtatgagctataccaaacagctgcctgaacaagggctaacccaagttgaa
gttctagacagaatcagagagtatcaaacactgaatgaagtggattgggagaaaggacga
gtttcaggcgcagtgtactggggagatcagacacttaccaaacttttggtgaaagtgtat
ggagactttgcatggagcaacccacttcacccagacctctttcctggtgtgaggaagatg
gaggcagagattgtgagaatggcgtgtaccctcttcaacggtgggcccaactcttgtggc
acagtcacctccggaggaactgaaagcatattgatggcatgcaaggcgtacagagacatg
gcctatgagcggggtgtgaaacatcctgaaatcattgcaccagtcagtgtccatgcagcc
tttgacaaagcagcaaactactttggaatgaagcttgttcatattcccctggacaagaag
accatgaaagtggatgttcaggctatgaggagagccatcaacaagaacacagccatgctt
gtgtgctccgcaccccagttcccccatggaatcattgatcctattgaggaagtaggaaag
ctggctgtaaagtacaacctccctctgcacgtggatgcttgtttgggagggtttctcatt
gtgttcatggccaaagccaattacccactggctccctttgacttcagggtaaagggtgtg
accagcatctctgcagacacacacaagtatggcttcgcccccaaaggttcatcagtgatc
ctgtatagtgacaagaagtacaggcattaccagtactttgtggctccagactggcagggg
ggcatctatgcgtccccatcagtggcaggttctcggccaggaggtatcatcgcagcgtgc
tgggccaccatgatgtacatgggagaagatggctacataaagactaccaagaagatcatt
gacactgcacgcaccatcaagacagaaatccgtaagatagacggagtgtttgtgtttgga
gaccctgaagtgtcggtggtggcaataggctctgacgtcttcgacattttccgtttatcc
aacgcactgacgtcaaagggttggaatctcaacacgctacagtatccatccagcatccat
atctgttgtacagtactacacacacaggaaggtgtggccaaacagttcatcagtgaggtc
aaagagcaggtggctctcatcttgaagaatcccaatgagaagaccactggaatgggagcg
atttatggcatggcccagtccatccctgacagatccatggtgacagagatctcctgcggt
ttcctggactgcctctacagcacagaggagcccaagtcatctcagccccagaagacccat
ataaatggcaacagcaacggcaaggcccactga
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