Coregonus clupeaformis (lake whitefish): 121553711
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Entry
121553711 CDS
T08357
Name
(RefSeq) attractin-like protein 1 isoform X2
KO
K24332
attractin
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
cclu04091
]
121553711
Lectins [BR:
cclu04091
]
C-Type lectins
Others
121553711
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ATRN-LZTR1
Kelch_KLHDC2_KLHL20_DRC7
GBD_ATRN
Kelch_5
Kelch_1
Kelch_3
Kelch_4
EGF_LMN_ATRN
Kelch_6
CUB
PSI
EGF_TEN
Kelch_2
NANM
EGF_Teneurin
EGF_2
TMEM100
EGF_laminin
RecR_ZnF
Motif
Other DBs
NCBI-GeneID:
121553711
NCBI-ProteinID:
XP_041722969
LinkDB
All DBs
Position
Unknown
AA seq
1374 aa
AA seq
DB search
MGGDCRGMHLCTWTKYPNMRPQDIKIYFGAFLMLYLVFYTEATVSKSCDKNCFSGKCING
TCVCDQGWVGAQCQHCQGRFKLTEPSGSLTDGPINYKYKTKCTWLIEGYPNAVLRLRFNH
FATECSWDHMYVYDGDSIYAPLVAVFSGLVVPETRGNETVPEVVATSGYALLHFFSDAAY
NLTGFHISYSVNSCPNNCSGHGKCSTGNSIASRVYCECDKYWKGEACDIPYCRNNCGSPD
QGYCDLTGEKSCVCNDSWQGPDCALSVPSTESYWVMSNVKPFSQSLGRASHKAVVHGKLM
WVIGGYTFNYSSFHMVLNYNLESSTWDVVPINSGPLQRYGHSLALYQDDIYMYGGKLEAG
SGNVTDELWVFNIPSRTWSLKNPSSLVQGQPYAVEGHSAHLAELTNGDVVMVVLFGYSPV
YSYISKVQEYNIRTNSWQVPETNGAIVQGGYGHSSVYDSSSRCVYVHGGYKALPANKYGL
VDELYRYEVQTQTWMILRESGLARYLHTAVLSSGTLLVFGGNTHNDTSLSNGAKCFSADF
LAYDMACDEWKVLPRPDLHRDVNRFGHTSVISNGSMYVFGGFSGVLLNDVLVYTPPSCQA
FSEEHRCANAGPGIRCVWIRNHCVLWDTRHANGSVPAPFCPPRTNSAAERCYRFSDCVSC
TANTNDCQWCEDKKCISASNNCTVSVRNFTKCHVRNEQICSKLVNCKSCSLNLNCQWELQ
QQECHAIPAQLCGEGWHHVGEACLRINSSRESYDNAQHYCKNLDGNIASLTTPKQVDFIL
DELQKYQLQEKKIAPWVGLRKINISYWGWEDMSPFTNSSLQWLPGEPSDSGFCAYLERVE
VAGLKANPCTATTDGLICEKPVVSPNQSARPCKTPCSLRTSCANCTSQTMECMWCSSTQR
CVDSNAYVISFPYGQCLEWQTGDCVSQNCSGLRTCGQCLDQAECGWCGDPTNTGKGQCME
GSYRGPMKSPSRQTRDRERDRDMVLEPGLCPRDKGFDWAYIHCPACQCNGHSTCVNGSAC
EQCRNLTTGPQCQTCMPGYHGDPTNGGKCQACKCNGHANLCQVSTGKCYCQTKGIKGDQC
QLCDSENRYLGNPLRGTCYYNLLIDYQFTFSLLQEDDHHYTAINFMATPEQSNKNLDMSI
NASNNFNLNITWSIGSTAGTISGEEVPIVSKTNIQEHRDSFSCEKFNFRVNSNITFYVYV
SNFSWPIKIQIAFSQHNSIMDLVQFFVTFFSCFLSLLLVAAVVWKVKQTCWASRRREQLM
RERQQMASRPFASIAVALDVGVDQEQEELLQGLVEGVPKPIAVEPCWGSRAGVLTVLMCL
PRVPSGIPPPGQSGIAIASALIDTSQQKPGDFRDKYHGLKNRKPHAVTHQGTCV
NT seq
4125 nt
NT seq
+upstream
nt +downstream
nt
atgggaggggactgccgaggaatgcatctatgcacatggactaaatatccaaatatgcga
ccccaggacatcaaaatatattttggggcattccttatgctgtacttggtgttttacacc
gaagccacagtctccaagtcctgtgataaaaattgcttttctgggaaatgcatcaatgga
acttgcgtctgtgaccaaggatgggttggagcccagtgtcaacactgtcagggaagattc
aagttaacagagccatcaggttccctcacagatggaccaatcaactacaagtacaagacc
aagtgcacctggctgatcgagggctacccaaacgctgtgctcaggttgcgcttcaaccat
tttgccacggaatgtagctgggaccacatgtacgtctatgatggagactccatctatgca
ccactggtcgcagtattcagcggtctcgttgtcccggaaacgagagggaacgagactgtt
ccggaagtggtagccacctctggatatgcactgttgcactttttcagtgacgctgcctac
aacctgactggattccacatctcctactcggtcaactcgtgccccaataactgctccggt
catgggaagtgcagcacggggaactctatcgccagccgggtgtactgcgagtgtgataag
tactggaagggcgaggcctgtgacatcccctactgcaggaacaactgtggtagccccgac
cagggctactgtgacctcactggggagaagagctgtgtctgcaacgacagctggcaaggt
ccagactgtgctctgtcagtgccgtccactgagtcttactgggtgatgtctaacgtcaag
cccttcagccagtccctgggcagggcctcccataaggctgtggtccatgggaaactcatg
tgggtcatcggaggatacaccttcaactacagctctttccacatggtgctcaattataat
ctggagagcagcacttgggacgtggtgccgatcaatagtggacctctgcagagatacggc
cattctctggctctttaccaggacgacatctacatgtatggggggaagctggaggccggt
tcaggcaacgtgacagacgagctgtgggtcttcaacatccctagtcgtacttggtccctg
aagaaccccagcagcctggtccagggacagccctacgccgtggagggacactccgcccac
ctggctgaactgaccaatggggacgtggtcatggtggtcctcttcggctactcccccgtc
tacagctacatcagcaaagtgcaggagtacaacatcaggacaaactcctggcaggtccct
gaaaccaacggggccatcgtccagggtggctatggccacagcagtgtgtatgacagctcc
agccggtgtgtgtacgtccacgggggctacaaggccctgcctgccaacaagtatggcctg
gtggacgagctgtatcgctatgaggtccagacacagacctggatgatcctgagagagagt
ggtctggcgcggtacctccacactgcagtgctgagcagtgggactctgctggtgtttgga
ggaaacacccacaacgacacgtccctcagtaacggagccaagtgcttctctgctgacttc
ctggcctacgacatggcttgtgatgaatggaaagtcctgcccaggccagatctccaccgt
gatgtcaaccgctttggccacacctcggtcatcagcaatgggtctatgtatgtgtttgga
ggtttctctggtgtgctgctgaatgacgtgctggtctacacccctcccagctgccaggcc
ttcagtgaggagcatcgctgtgccaacgccggccctggcatccgctgtgtctggattagg
aaccactgtgtcctctgggacaccagacatgccaacggcagcgtgccggctcccttctgc
cccccacgcaccaacagtgcagccgagaggtgttacaggttctctgactgtgtcagctgc
actgccaacaccaacgactgccagtggtgtgaagacaaaaagtgcatctctgcctccaac
aactgcactgtgtctgtgaggaacttcaccaaatgccatgtgaggaatgaacagatctgc
agtaagctggtcaactgtaagagctgctccctcaacctcaactgtcaatgggagctccag
caacaggagtgccatgccatccctgctcagctctgtggggaaggttggcaccacgttggg
gaggcctgcctcaggatcaactccagcagggagagctatgacaacgcccagcactactgt
aagaacctggacgggaacatagcctccctcaccacccccaagcaggtggactttatactg
gacgagctgcagaagtaccagctacaggagaagaagatagctccgtgggtgggcctgagg
aagatcaacatctcgtactggggctgggaggacatgtctcccttcaccaactcctctctg
cagtggctgcctggagagcccagcgactcaggcttctgtgcctacctggagagggtagag
gtggcagggctcaaggccaacccctgcaccgccaccaccgacggactcatctgtgaaaaa
ccagttgtgagccccaaccagagtgcccgtccgtgtaagacgccttgctccttgcgtacc
tcctgtgccaactgcaccagccagaccatggagtgtatgtggtgcagcagcacccagcga
tgtgtggactccaacgcctacgtcatctccttcccctacggacagtgtctggagtggcag
actggagactgtgtctctcagaactgttcgggcctgaggacgtgtggccagtgtttggat
caggcagagtgtggctggtgtggagaccccactaacacagggaagggccagtgtatggaa
gggtcataccgcgggcccatgaaaagcccctccagacagaccagagacagggagagggac
agagacatggtgctggagcctggtctgtgccccagagataaagggttcgactgggcctac
atccactgccctgcctgtcagtgtaacggccacagtacgtgtgtcaacggcagtgcttgt
gagcagtgcaggaacttgaccaccggaccgcagtgccagacctgcatgcctggttaccat
ggcgaccccactaacggcgggaagtgccaggcctgcaagtgcaacggacatgccaatcta
tgccaggtgtcgacggggaaatgctactgccaaaccaagggaatcaagggagaccagtgc
cagctttgcgactccgagaaccgttaccttggcaaccccctcagaggaacgtgttactac
aacctgctgattgactaccagttcaccttcagccttctccaggaggatgaccaccactac
accgccatcaacttcatggccactcctgaacagagcaacaagaacctggacatgtcgatc
aatgcgtccaacaacttcaacctcaacatcacctggtctattggatcaacagctggcacc
atctctggcgaggaggttcccatcgtgtccaagaccaatatccaggaacacagagacagc
ttctcctgtgagaagttcaacttccgggtcaactccaacatcaccttctatgtctatgtc
agcaacttctcctggccaatcaagatccagatcgccttctcccaacacaacagcatcatg
gacctggtacagtttttcgtcacatttttcagctgtttcctgtccctgttgctggtggcg
gcggtggtgtggaaggtcaaacagacgtgctgggcgtccaggaggagagagcagctcatg
cgggagcgacagcagatggccagccgtccctttgcctcgattgcggtggcgctggatgta
ggcgtcgaccaggaacaggaagagctgctgcaggggctggtggagggtgtacccaagcct
atagcagtggagccatgttgggggagcagggccggtgtactgaccgtcctcatgtgtctg
cccagagtcccttcaggaataccaccgcctggccagtctggcattgccatcgccagtgcc
ctgatcgacacctcgcagcagaaacctggagacttcagagacaagtaccatggcctgaag
aaccgcaaaccgcacgcagtaacgcatcaggggacctgtgtttga
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