Coregonus clupeaformis (lake whitefish): 121553732
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Entry
121553732 CDS
T08357
Name
(RefSeq) gamma-aminobutyric acid receptor subunit pi-like
KO
K05189
gamma-aminobutyric acid receptor subunit pi
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04080
Neuroactive ligand-receptor interaction
cclu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121553732
04082 Neuroactive ligand signaling
121553732
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cclu04040
]
121553732
Ion channels [BR:
cclu04040
]
Ligand-gated channels
GABA-A
121553732
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
YbhQ
Motif
Other DBs
NCBI-GeneID:
121553732
NCBI-ProteinID:
XP_045067366
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All DBs
Position
37:complement(9057094..9151725)
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AA seq
461 aa
AA seq
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MAALPSGGRVIVMLLISRMLENSLLSAEVKEGEILPPTIQKLMKGYNKYLRPFFDNGPVT
VGMSLDIASIDTISEINMDYTATIFLRQRWTDERLVFEGNKSLSLDGRLVELLWVPDTFI
VDSKKSFLHDITVENRLIRIFPNGTVLYALRITTTVACNMDLTKYPMDKQTCTLQLESWG
YNINDVMFYWTRGNESVSGLDTLRLAQYTVEDHYTSASEAIYETGHYPKLIFHFELKRSI
LYFILETYVPSSLLVVLSWVSFWISQSSVPARICIGVTTVLTMTTLMMGARTSLPNANCF
IKAIDVYLGICFSFIFGALIEYAVAHFCTLNHPNANIVMYGHQMGGFDEEMNGMVTTIAA
ENNRAKRRKEKAAADAAALAPTAELELCPSSPTGSEPKPEAPEEPTNRCLIVLVLLRKVL
RKAANCCHVENPHLIDNYSRMTFPLSFVFVNLLYWTYYLYL
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgctcccctctggagggagagtgatcgtcatgctcctcattagcaggatgtta
gagaactcgctgctcagcgctgaagtgaaggagggagagattctgcctcccaccattcag
aaactgatgaaaggatacaacaagtacctcaggcctttctttgacaatgggccagtgact
gtgggcatgagtttggatattgccagcattgacaccatatcagagatcaacatggactac
acggccactatcttcctgcgtcagcgctggacagacgagcgcctggtgtttgaggggaac
aagagcctgagtctggacggcaggctggtggagctgctctgggtaccagacactttcatc
gtagactccaaaaagtccttcctccatgacatcactgtggagaacaggctgatcaggatc
ttccccaatggaacggtgctctatgccctgaggatcaccaccactgtggcctgcaacatg
gacctgaccaaataccccatggacaagcagacctgcactctgcaactagagagctggggc
tacaacatcaatgatgtgatgttctactggaccagagggaatgagtcggtcagtggtttg
gacacgctgcgtctggctcagtacacagtagaggaccactacacctctgcatctgaggcc
atctatgaaacaggccactaccccaagctgatcttccactttgagctgaagagaagcatc
ctgtacttcatcctggagacgtacgttccctccagcctgctggtggtcctgtcctgggtc
tccttctggatcagccagtcttccgtccctgcaaggatctgtatcggagtgaccacggtt
ctgacgatgaccacgttgatgatgggtgccaggacgtccctgcccaacgccaactgtttc
atcaaggccatcgacgtgtacttgggcatctgcttcagcttcatcttcggagccctgatc
gagtatgccgtggcccacttctgcacccttaaccaccccaacgccaacattgtcatgtac
ggtcaccagatgggaggctttgacgaggagatgaacggcatggtcaccaccatcgctgct
gaaaacaacagggccaagaggcgtaaggagaaagctgctgcagatgctgcagccttggcg
cccacagcagagctggaactttgcccctccagccccactggcagtgaacccaagcctgag
gcacctgaggagcccaccaaccgctgcctcattgtcctggtcctcctccgtaaggtcctg
cgcaaagctgcaaactgttgccatgtggagaatccccacttaatagacaactactccagg
atgaccttccccctctcctttgtatttgtcaatctcctctattggacatactacctgtac
ttgtaa
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