Coregonus clupeaformis (lake whitefish): 121553741
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Entry
121553741 CDS
T08357
Name
(RefSeq) regulating synaptic membrane exocytosis protein 1 isoform X1
KO
K15291
regulating synaptic membrane exocytosis protein 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
121553741
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121553741
Membrane trafficking [BR:
cclu04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
121553741
Small GTPases and associated proteins
Rab associated proteins
121553741
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
RIM2a_ZnF
PDZ
FYVE_2
PDZ_6
Zn_ribbon_Nudix
Zn_ribbon_recom
Motif
Other DBs
NCBI-GeneID:
121553741
NCBI-ProteinID:
XP_041723027
LinkDB
All DBs
Position
37:26361868..26423501
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AA seq
1580 aa
AA seq
DB search
MSASVGPRGGARPPVVPASMPEPDLSHLTEEERKIIMAVLARQKEEEEKEEAMLKEEKPI
QARTVNLVGQKKPPQQNDVRGIQQQLSSYRETVRRVGEETRRQTTTGQHRDDAPTCGICH
KTKFADGCGSLCSYCQTKFCARCGGRVSLRTNNEDKVVMWVCNNCRKQQEILTKPGEWFS
GPGKPGLGSGISDPAMCGQNPGDKKLRSHSQVPLGPLDPNHPGDPGLAPGMDPRSRIEPP
RKPGDQNVKGRGERRPGHPRLYTQVSVDRDQWERERRDGRRLSKGRSLEHDPVGAGVPRW
TEEGYHIDPNAPRHLAQPQPGEPLRGRHPLQPQGRGRGVGMVIGFESVEGIGGQPEAMLG
QRTVVGGIRGQQDLGPPQLQPPELREPPGTGPGPGPCQDPLLRRSKREKAERMLRNDSLS
SDQSESLRPPPPRPYKSKRGGAGKRQTSVSSSEEEGGTTPEYSSCEDAEIESVSERGDWE
CYPLDPTVWHHPVTWQPSKEGDHLIGRITLSKRSAMPKEAGALLGLKVVGGRVTEAGRLG
AFITVVKKGSLADIVGHLRAGDEVLQWNGKMLPGATQKEVYNIILNSQAEPQVELVVSRP
IGVYKVYHDIPRIPDTSHPPLESTLTAGSSSFESQKMERPSISVMSPTSPSTLRDNPQLM
PGQLAVLPGQLSVKLWYDKVGHQLIVNVVQATELPPRPDGRPRNPYVKMYFLPDRSDKSK
RRTKTVKKSEEPKWNQTFVYSHVHRRDFRQHMLELTMWDQPRLPDEDSMFMGEILIELET
APLDDKPHWYKLQTHDMSSIPLPRPSPYMPRRNTDTPSKKLQRSQRVKEPEYDDTGPMSK
AAERGSRERGREQKDPHAATLEVPEQKRTPQHRSRSVSPHREEQGRGRSRPANVPTQRSL
DDEIHHSRRSRSPTHYYDSTRGHYQEQDYVDDSEVIMIHQSMRGKSAECLHTKRESSRQS
NTLPPKMPLLVNGIHKDIYSSTLPACLKTRSMVRSSVVTAMRSSLTQRVLRFTDEITISD
LHTSLDRVRTRSASTNCLNPERNHSVPSPEPQSCSQSLPRRRPASPRILIQHASPEDDSQ
WMMEPLVPRQETVNHLSAKKRQTRTLDSSTCHTLGKKLPDHDRGHLQGGASLSSSVTSSS
AARRVRQLPQVPDKSSSPVEQALAAEERVRQLQMKVQQRDSYRSSAAPSTSSRDVERVLK
SKREVSHLSLELYKDQRRTSCENVSRKSSDSDVSDVSAISRTSSASRISSTSYMSIQSER
PRGRFNKAMHASGRSMLKSTSVSGEIFGIEHTDGSQSDTALGGGKKRRSSLSQRVVAIVG
LPSRRSCSTSQLTSQKVVVDTKKKGKKKNKIQIQRSTEVGMAVEYPRSAMNRQASRDSTD
GSMNSYSSEGNLIFSGMRLGADSQFSDFLDGLGPAQLVGRQTLATPAMGDVQIGMMDKKG
QLEVEVIRARGLTPKPGSKSLPAPYVKAYLLDNGACKAKKKTKIARKTLEPLYQQALLFE
ESPQGKVLQVIVWGDYGRLDHKCFMGVAQILLEELDLSSTVIGWYKLFPPSSLVDPTLAS
LTRRASQTSLDSSGPAGMRS
NT seq
4743 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcctcggtgggccctcggggcggcgcgcgcccacccgtcgtgccggcgtccatg
cccgagccggacctgagccatctgacggaggaggagaggaagatcatcatggccgtgcta
gctcgacagaaggaggaggaggagaaggaagaggccatgttaaaggaggagaagcccatc
caagcaagaactgtgaacctggttgggcagaagaagcctcctcagcaaaatgatgtccga
ggtatccagcagcagttgtccagctacagggagacggtgcggcgggtgggggaggagaca
cgtcggcagaccaccacgggccagcaccgggacgacgctcccacctgtggcatctgccac
aagaccaagtttgctgatggctgtggcagcctctgctcttactgccagaccaagttctgt
gcccgctgcggagggagggtgtccttgcgcaccaacaatgaggacaaagtggtgatgtgg
gtgtgtaataactgccgtaagcagcaggagatccttactaagccaggggagtggttctca
ggtccagggaagccaggtctaggctcaggcatcagtgacccggccatgtgtggccagaac
cccggtgacaagaagctccgttcccactcccaagtccccctggggcccctcgaccccaat
caccccggtgacccaggactggcacccggaatggacccccgctcacgtatcgagccgccg
agaaagccgggcgatcagaacgttaaaggtcgaggtgagcgtcggccgggtcatcccaga
ctttacacccaggtgtcagtggaccgggaccagtgggagcgggagcggagagatggccgg
cggctgagtaagggccgctctctggaacacgaccctgtgggagcgggggtcccccgatgg
acagaagagggctaccacatagaccccaacgccccccgacatttagcccagccccagcca
ggggagccactgaggggcaggcaccctctacagccccaggggcgaggcaggggggttggg
atggtgattgggtttgagagtgttgagggcattgggggccagcccgaggctatgctgggc
cagaggacggtggtggggggcattagggggcaacaggacctcggccctccacagctccag
cccccagaactcagggagccccctgggacaggcccgggccccggaccctgtcaggaccct
ctcctgcgccggtccaaacgggagaaggctgagaggatgctgcgtaacgattcgctcagc
tcggaccagtcagagtctttgcggccgcccccaccacggccctacaagtcaaaacgtggc
ggtgccgggaagagacagacatcagtcagcagctcagaggaagagggagggaccacgccg
gagtacagcagctgtgaggatgccgagatcgagagtgtcagcgagagaggggactgggag
tgctacccgctggaccccactgtgtggcatcatccggtgacatggcaaccgtccaaagag
ggtgaccatctaattggccgaatcaccctgagcaagaggagcgctatgcccaaagaagcc
ggagcactgctggggctgaaggtggttgggggaagggtcacagaggcaggaagactggga
gccttcatcactgtagtcaagaagggcagtctggccgacattgtgggacaccttcgagca
ggggatgaggttctgcagtggaacggcaagatgttgccaggagcaacccagaaagaagtt
tataatataattctcaattcccaagcagaaccccaagtggaactagtggtgtcccggccc
attggggtgtataaagtctatcatgatatcccaagaatcccagacacgtcccaccctcca
ttagaatctaccctcacagcaggttccagttcatttgagtcccagaagatggagcggcca
tctatatcagtcatgtcccccaccagccccagtacacttagagacaacccacagctaatg
cctggacagcttgcagtactgcccggacaactttcagtcaagctgtggtatgataaggtg
ggacaccagctgattgtgaacgtggtacaggccacagaactacctccccggccggacggg
cgacccagaaacccttacgtcaaaatgtacttcctgccagaccgaagcgataagagcaag
cggaggactaagacagtgaagaagagtgaagagccaaagtggaaccagacgtttgtgtac
tcccacgtccaccgcagagacttccgccaacacatgctggagctgaccatgtgggaccag
cctcgcctacctgacgaggatagcatgttcatgggagagatcttaatagagctggagaca
gccccgttagatgacaagcctcactggtacaagctgcagacccacgacatgtcgtctatc
cccctgccccggccatccccttacatgccccgcagaaacacagacacacccagcaagaag
ctgcagcgttctcagcgtgttaaagagcctgagtacgatgacactggacctatgtctaaa
gctgccgagaggggctcgcgggagagggggagggagcagaaagatccccacgccgccact
ctggaggtgccggagcagaagaggacaccccagcatcgctctcgatctgtctctcctcac
agagaggaacagggcagggggcgatcacgacccgccaacgtccccacacagaggagtttg
gatgatgagatccaccatagtaggaggtctcgttctcccacccactactatgactctacc
agaggacactaccaggagcaggactatgtagatgacagtgaggtcatcatgatccaccag
tcaatgcgaggcaaaagtgcagaatgcctacacactaaaagggaatcttctagacaaagt
aacacactcccccctaagatgcccctcttagtcaatggcatccacaaggacatttacagt
tccacgctgcctgcatgtctaaagactaggtcaatggtgcgctccagtgttgtcacggca
atgcgcagctctttgacacaacgagttctcaggtttacagacgagatcaccattagtgat
ctacatacctctctggacagggttaggactaggagcgctagcaccaactgtctgaaccca
gaaaggaaccatagtgttccttcaccagagccccaaagctgctcccagtctctgccccgc
agacgccccgccagccccaggattctaatccaacacgcctccccagaagacgacagccaa
tggatgatggagcctctagttcctagacaggagacagttaaccacctcagtgcaaagaag
aggcaaactcggaccctggactcatccacctgtcacactctgggcaagaagctccctgac
catgacaggggccacctccaaggtggtgcgtctctgtcctcctcagtgacgtcctcgtca
gcagctcgcagggtcagacaactcccacaggtcccagacaagagcagcagccccgtagag
caagctcttgcagcagaggagcgtgttcgtcagctccagatgaaggtacagcagagggac
tcctacaggagttctgctgctccgtccacttccagcagggatgtggagagggtgctcaag
agcaaacgcgaggtcagtcacctgtcacttgagctgtataaggaccagaggagaaccagc
tgtgagaacgtatcccgcaagtcttcagacagtgatgtcagcgacgtgtcagccatctct
cgtaccagcagtgcctcccgcatcagcagtaccagctacatgtccatccagtcagagaga
ccccggggacgcttcaacaaggcgatgcatgcatcaggccgcagcatgttgaagagcacc
agcgtgagcggtgaaatctttggcattgagcatacggacggcagccaatcagatacagca
ttgggcgggggcaagaagcggcgctccagcctcagccaacgggtggtggccattgtgggc
ctgccctccagacgcagctgcagtacctcacagctcacctcccagaaagtggtggtggat
actaagaagaagggcaagaaaaagaacaaaattcagatccagcggagtacagaggtgggt
atggctgtagagtacccccgctctgccatgaaccgccaggccagcagagactccaccgac
ggcagcatgaacagctacagctctgaggggaatctaatcttctcggggatgaggctgggg
gctgacagtcagttcagtgacttcctggatggccttggccccgcccaactggtgggccgg
caaacattagccacacccgccatgggagatgttcagatcggaatgatggacaaaaaaggc
cagctggaggtggaggtgatcagagcacgtggccttacccccaaaccagggtccaaatca
ctcccagctccctatgtcaaggcatacctgctggataacggagcctgtaaagccaaaaag
aaaaccaagattgcacgtaaaaccctggagccactctaccagcaggccctgctgtttgag
gagagcccacaggggaaggtcctccaggtaatagtctggggcgactacgggcgactggat
cacaaatgcttcatgggagttgcacagatcctattggaggagctggacctctccagcaca
gtgattggctggtacaaactgtttcctccttcctcattggtggaccctaccttagcctcg
cttactcggcgggcgtcccagacatccttggacagctcaggaccagctggtatgcgttct
tag
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