KEGG   Coregonus clupeaformis (lake whitefish): 121553749
Entry
121553749         CDS       T08357                                 
Symbol
wdr11
Name
(RefSeq) WD repeat-containing protein 11
  KO
K24260  WD repeat-containing protein 11
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cclu04131]
    121553749 (wdr11)
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:cclu03037]
    121553749 (wdr11)
Membrane trafficking [BR:cclu04131]
 Endosome - Lysosome transport
  Others
   Others
    121553749 (wdr11)
Cilium and associated proteins [BR:cclu03037]
 Other cilia and associated proteins
  Other cilium assembly proteins
   121553749 (wdr11)
SSDB
Motif
Pfam: Beta-prop_WDR11_2nd TPR_WDR11 WD40_CDC20-Fz Beta-prop_WDR11_1st Beta-prop_WDR3_1st Beta-prop_WDR36-Utp21_1st Beta-prop_THOC3 Beta-prop_WDR5 WD40_Prp19 Beta-prop_EML_2 EIF3I ANAPC4_WD40 WD40_WDHD1_1st WDR55 Beta-prop_WDR35_TULP_N Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR41 Beta-prop_RIG_1st Beta-prop_IFT140_1st TPR_GEMI5 RAB3GAP2_N Beta-prop_RSE1_2nd
Other DBs
NCBI-GeneID: 121553749
NCBI-ProteinID: XP_041723047
LinkDB
Position
37:2391424..2582360
AA seq 1248 aa
MIPYSVNVKLAARTLTGTLNLQNKTAVDWGWQGLIAQGCHSSILIIDPKTSQTIQVLERH
KANVVKVKWSRENYHHSLSSPYSLRLASADAAGKIIVWDVVSGTAHCEIQEHSKPIQDMD
WLWTQDASRDLLLAIHPPNYIVLWNGDTGTKLWKKSYAENILSFSFDPFDPSNLALLTSE
GIVFISDFSHSKPPGSGGKKVYIASPHASPAHTKPVPAALPAPTGAKKALNKVKVLITNE
KPTAEAVTLNADCLQLSYLPSKRNHMLLLYPREILILDLELSQTVGVVGIERSGVPFFQV
IPCAQRDALFCLHENGCITLRVCRCTTAPDESVAASDPEQSVQELVYDLRSQCDAIRVTK
TVRPYRMVICPVNENNAALTVSDGRVMLWELKAHVSKPTVNPSSGLSPLYTPVAFCGSPL
GQNQKKIQNLSLNTMIGQSLVSGADPPPPSPQQEVQLKFLLTGLLSGLPLPPFALRMCPP
LTTKNINHYQPLLAVGTSNGSVLVYNLTSGLLHKDLSVHSCEVKGIEWVSLTSFLSFATS
TPNNAGLVRNELQHVDLPTGRCFAFRGEQGNDEPAIEMMKVSHLKQYLVVVFRDKPLELW
DVRTGTLLREMAKNFPTVTALEWSPSHNLKSLKKKQMLAREAMARQTTLSDTEQSSVEYN
VISLLQDAESKSEGGGQAISAREHFVFTDTDGQVYHITVEGNTVKDGARIPPDGSMGSIA
CIAWKGDTLVLGDVDGNLNFWDLKARLSRGIPTHRGWVKKIRFAPGKGNQKLLVMYTDGA
EVWDTKEVSMVSSLRIGRNVNYRILDIDWCTSDKVVLASDDGCIRVLEMAMKSASYRMDE
QDLTDPVWCPYLLLPRAALTLKAFLLLQPWSGTFTMDITQVDYIEKYEIKGLIQEQLNSM
SNDMKSVLLDPELNLLQRCLLVSRLFGDESDLQFWTVAAHYLQSFAQARHLSVPVPEGQT
PAEGTQATPQGHLDIYHDTLCESFYFQRFQLERVHLQEVKRSSYDHTKKCADQLLLLGQT
DRAVQLLLETSADNPSYYCDSLKACLVTTITSSGPSQSTIKLVATNMIANGKLAEGVQLL
CLIDKAADACRYLQTYGEWNRAAWLAKVRLNPAESSDVLKRWAEHLCSPQVNQKSKAILV
LLSLGCFHKVGEMLQSMRYFDRAALFIEACLKYGVMEANDSTNKLIGAAFVDYARLLRNL
GLRESAAFWASRAGGAGEQLLEELFQGEEAVPEAVPGEEETEGLENTE
NT seq 3747 nt   +upstreamnt  +downstreamnt
atgattccttactctgtcaacgttaaactcgcggcgcggacattgactggcacgctcaat
ttgcagaacaaaactgctgttgactggggttggcaggggctgatagcccagggatgtcac
tccagcatcctcatcatcgatccaaagacttcccagaccatccaggttctggagaggcac
aaagccaatgtggtcaaggtgaaatggtccagggagaactaccaccacagcctgagctcg
ccctactctctgaggctggcctctgccgatgcagcagggaagattatcgtgtgggatgtg
gtgagtggcacggcccactgtgagatccaggagcactccaaacctatccaggatatggac
tggttgtggactcaggacgcttcacgtgatcttctcctggccatccatccacccaactac
atagtcctgtggaacggagacacagggaccaagctgtggaagaagagttatgccgagaac
atcctctccttctcttttgacccgttcgatccatccaacctggcattgctgaccagcgaa
ggcattgtcttcatctccgacttctctcactccaaacccccgggcagcgggggcaagaag
gtctacatcgccagcccccatgccagccctgcacacactaagcctgtgcctgctgccctc
cctgcccccaccggtgccaagaaggccctgaacaaggtcaaagtgctcatcaccaacgag
aagcccacagcggaggctgtgacgctgaatgcagactgcctgcagctgtcctacctgccg
tccaagaggaaccacatgctgctgctctaccccagagagatcctcatcctggaccttgag
ctcagccagaccgtgggtgtggtgggcattgaacgctccggggtgcccttttttcaggtg
atcccctgtgcccaaagagacgccctcttctgtctccacgagaacggctgcatcactctg
agggtgtgtcgctgcaccaccgcacccgacgaatcagtagcagcgtcagatccagagcag
agtgtccaggagctggtgtatgacctgcgttcccagtgtgatgccatcagggttaccaag
accgtgcgaccttaccgcatggtcatctgtccagtcaatgagaacaacgccgccctgacg
gtcagcgacggccgtgtcatgctgtgggagctcaaagcccatgtgtccaagcccacggtc
aaccccagctcgggcttgtcccccctctacactcctgtggcattctgtggttcaccactg
ggtcagaaccagaagaagattcagaacctgtctcttaacaccatgatcggtcagagtttg
gtttcgggagcggacccaccgcccccctcaccgcagcaggaggtacagctgaagttcctg
ttgacagggctactgtcggggcttcccctgccccccttcgccctgaggatgtgcccccca
ctgaccaccaagaacatcaaccactaccagcccctactggctgtgggtaccagtaatggg
tcagttctggtctataacctcacaagtggtcttctgcacaaggacctgagtgtccactcc
tgtgaagtcaaaggcatagaatgggtcagtctcaccagcttcctgtcctttgccacttca
acccccaacaacgctggactggtgaggaatgagctgcagcacgtcgaccttcccactggc
aggtgctttgcattccgaggcgagcaggggaacgacgagcctgccattgagatgatgaaa
gtgtctcatctgaagcagtacctggttgtggtgttcagagacaagcctctggagctgtgg
gacgtcaggaccggcaccctgctacgagagatggccaagaacttccccactgtcactgca
ctggagtggtccccctcccacaacctgaagagtctgaagaagaagcagatgttagcacgg
gaggccatggccagacagaccactctgtctgacaccgagcagagcagcgtggagtacaac
gttatcagtcttctgcaggatgcagagagtaaatcggagggaggaggccaggccatttca
gcgagggaacactttgtgttcacagacacagacggacaggtgtaccacatcactgtcgag
gggaataccgtcaaagacggtgcccgcatccccccagacggcagtatgggtagcattgcg
tgcatcgcctggaagggagacactctggttctcggtgatgtggacgggaacctcaacttc
tgggacctcaaggcccgtctctccaggggaatccctactcaccgtggttgggtgaagaag
atccgttttgcccctgggaaagggaaccagaagctactggtcatgtacacagatggggca
gaagtctgggacaccaaagaggtgagcatggtgagcagcctgcggattggtcggaacgtg
aactaccgtatcctggacattgactggtgcacctcggacaaggtggtgttagcctctgac
gacggctgcatccgtgtgctggagatggccatgaagtctgccagctacaggatggatgaa
caggacctgactgatcctgtgtggtgtccgtacctgctgctcccccgtgctgccctcacc
ctgaaggccttcctcctgctgcagccctggtctggcaccttcaccatggacatcacacaa
gtggattacattgaaaaatatgagattaagggcctgatccaggaacagctcaactccatg
tccaatgacatgaagagcgtcctgcttgatcccgagctcaacctgctgcaacgctgcctc
cttgtgtctcggctgtttggggacgagtcggacctgcagttctggacggtggcggcccac
tatctccagtcattcgcccaggcccgccacctcagtgtgcccgtccccgagggccagacc
ccagccgaggggactcaggccaccccacagggccacctggacatctaccacgacaccctg
tgtgagagcttctacttccagaggttccagttggagcgagtccatctacaggaggtgaag
aggtccagttatgaccacaccaagaagtgtgctgaccagctcctcctgctgggacagacg
gaccgagcggtgcagttgctgttggagactagtgctgacaaccccagttactactgtgac
tcgctgaaggcgtgtctggtgaccaccattacctcctcagggccctcccagagcaccatc
aaactagtggccaccaacatgatcgccaacggcaagctggcagagggggtgcaactgctg
tgtttgattgacaaggctgcggacgcatgccgatacctgcagacttatggggagtggaac
cgtgctgcctggctggctaaggtgcgtctgaacccggcagagagctcagacgtgctaaag
cgttgggcagagcacctctgctccccccaggtcaaccagaagtctaaggccatcctagtg
ctgctctccctgggctgcttccataaagtaggagagatgctccaaagcatgaggtacttt
gaccgcgcggcgctcttcattgaagcctgtctgaagtacggggtgatggaggccaacgat
tccaccaataagctgatcggggctgcgttcgtggactacgcccgactgctgcgcaacctg
ggcctgagggagagcgccgcgttctgggcatcgcgggcagggggcgccggagagcagctg
ctggaggaactcttccagggagaggaggcagtgccagaggctgtacccggggaggaggaa
acggagggcctggagaacaccgagtga

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