Coregonus clupeaformis (lake whitefish): 121553749
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Entry
121553749 CDS
T08357
Symbol
wdr11
Name
(RefSeq) WD repeat-containing protein 11
KO
K24260
WD repeat-containing protein 11
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121553749 (wdr11)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cclu03037
]
121553749 (wdr11)
Membrane trafficking [BR:
cclu04131
]
Endosome - Lysosome transport
Others
Others
121553749 (wdr11)
Cilium and associated proteins [BR:
cclu03037
]
Other cilia and associated proteins
Other cilium assembly proteins
121553749 (wdr11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR11_2nd
TPR_WDR11
WD40_CDC20-Fz
Beta-prop_WDR11_1st
Beta-prop_WDR3_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_THOC3
Beta-prop_WDR5
WD40_Prp19
Beta-prop_EML_2
EIF3I
ANAPC4_WD40
WD40_WDHD1_1st
WDR55
Beta-prop_WDR35_TULP_N
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR41
Beta-prop_RIG_1st
Beta-prop_IFT140_1st
TPR_GEMI5
RAB3GAP2_N
Beta-prop_RSE1_2nd
Motif
Other DBs
NCBI-GeneID:
121553749
NCBI-ProteinID:
XP_041723047
LinkDB
All DBs
Position
37:2391424..2582360
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AA seq
1248 aa
AA seq
DB search
MIPYSVNVKLAARTLTGTLNLQNKTAVDWGWQGLIAQGCHSSILIIDPKTSQTIQVLERH
KANVVKVKWSRENYHHSLSSPYSLRLASADAAGKIIVWDVVSGTAHCEIQEHSKPIQDMD
WLWTQDASRDLLLAIHPPNYIVLWNGDTGTKLWKKSYAENILSFSFDPFDPSNLALLTSE
GIVFISDFSHSKPPGSGGKKVYIASPHASPAHTKPVPAALPAPTGAKKALNKVKVLITNE
KPTAEAVTLNADCLQLSYLPSKRNHMLLLYPREILILDLELSQTVGVVGIERSGVPFFQV
IPCAQRDALFCLHENGCITLRVCRCTTAPDESVAASDPEQSVQELVYDLRSQCDAIRVTK
TVRPYRMVICPVNENNAALTVSDGRVMLWELKAHVSKPTVNPSSGLSPLYTPVAFCGSPL
GQNQKKIQNLSLNTMIGQSLVSGADPPPPSPQQEVQLKFLLTGLLSGLPLPPFALRMCPP
LTTKNINHYQPLLAVGTSNGSVLVYNLTSGLLHKDLSVHSCEVKGIEWVSLTSFLSFATS
TPNNAGLVRNELQHVDLPTGRCFAFRGEQGNDEPAIEMMKVSHLKQYLVVVFRDKPLELW
DVRTGTLLREMAKNFPTVTALEWSPSHNLKSLKKKQMLAREAMARQTTLSDTEQSSVEYN
VISLLQDAESKSEGGGQAISAREHFVFTDTDGQVYHITVEGNTVKDGARIPPDGSMGSIA
CIAWKGDTLVLGDVDGNLNFWDLKARLSRGIPTHRGWVKKIRFAPGKGNQKLLVMYTDGA
EVWDTKEVSMVSSLRIGRNVNYRILDIDWCTSDKVVLASDDGCIRVLEMAMKSASYRMDE
QDLTDPVWCPYLLLPRAALTLKAFLLLQPWSGTFTMDITQVDYIEKYEIKGLIQEQLNSM
SNDMKSVLLDPELNLLQRCLLVSRLFGDESDLQFWTVAAHYLQSFAQARHLSVPVPEGQT
PAEGTQATPQGHLDIYHDTLCESFYFQRFQLERVHLQEVKRSSYDHTKKCADQLLLLGQT
DRAVQLLLETSADNPSYYCDSLKACLVTTITSSGPSQSTIKLVATNMIANGKLAEGVQLL
CLIDKAADACRYLQTYGEWNRAAWLAKVRLNPAESSDVLKRWAEHLCSPQVNQKSKAILV
LLSLGCFHKVGEMLQSMRYFDRAALFIEACLKYGVMEANDSTNKLIGAAFVDYARLLRNL
GLRESAAFWASRAGGAGEQLLEELFQGEEAVPEAVPGEEETEGLENTE
NT seq
3747 nt
NT seq
+upstream
nt +downstream
nt
atgattccttactctgtcaacgttaaactcgcggcgcggacattgactggcacgctcaat
ttgcagaacaaaactgctgttgactggggttggcaggggctgatagcccagggatgtcac
tccagcatcctcatcatcgatccaaagacttcccagaccatccaggttctggagaggcac
aaagccaatgtggtcaaggtgaaatggtccagggagaactaccaccacagcctgagctcg
ccctactctctgaggctggcctctgccgatgcagcagggaagattatcgtgtgggatgtg
gtgagtggcacggcccactgtgagatccaggagcactccaaacctatccaggatatggac
tggttgtggactcaggacgcttcacgtgatcttctcctggccatccatccacccaactac
atagtcctgtggaacggagacacagggaccaagctgtggaagaagagttatgccgagaac
atcctctccttctcttttgacccgttcgatccatccaacctggcattgctgaccagcgaa
ggcattgtcttcatctccgacttctctcactccaaacccccgggcagcgggggcaagaag
gtctacatcgccagcccccatgccagccctgcacacactaagcctgtgcctgctgccctc
cctgcccccaccggtgccaagaaggccctgaacaaggtcaaagtgctcatcaccaacgag
aagcccacagcggaggctgtgacgctgaatgcagactgcctgcagctgtcctacctgccg
tccaagaggaaccacatgctgctgctctaccccagagagatcctcatcctggaccttgag
ctcagccagaccgtgggtgtggtgggcattgaacgctccggggtgcccttttttcaggtg
atcccctgtgcccaaagagacgccctcttctgtctccacgagaacggctgcatcactctg
agggtgtgtcgctgcaccaccgcacccgacgaatcagtagcagcgtcagatccagagcag
agtgtccaggagctggtgtatgacctgcgttcccagtgtgatgccatcagggttaccaag
accgtgcgaccttaccgcatggtcatctgtccagtcaatgagaacaacgccgccctgacg
gtcagcgacggccgtgtcatgctgtgggagctcaaagcccatgtgtccaagcccacggtc
aaccccagctcgggcttgtcccccctctacactcctgtggcattctgtggttcaccactg
ggtcagaaccagaagaagattcagaacctgtctcttaacaccatgatcggtcagagtttg
gtttcgggagcggacccaccgcccccctcaccgcagcaggaggtacagctgaagttcctg
ttgacagggctactgtcggggcttcccctgccccccttcgccctgaggatgtgcccccca
ctgaccaccaagaacatcaaccactaccagcccctactggctgtgggtaccagtaatggg
tcagttctggtctataacctcacaagtggtcttctgcacaaggacctgagtgtccactcc
tgtgaagtcaaaggcatagaatgggtcagtctcaccagcttcctgtcctttgccacttca
acccccaacaacgctggactggtgaggaatgagctgcagcacgtcgaccttcccactggc
aggtgctttgcattccgaggcgagcaggggaacgacgagcctgccattgagatgatgaaa
gtgtctcatctgaagcagtacctggttgtggtgttcagagacaagcctctggagctgtgg
gacgtcaggaccggcaccctgctacgagagatggccaagaacttccccactgtcactgca
ctggagtggtccccctcccacaacctgaagagtctgaagaagaagcagatgttagcacgg
gaggccatggccagacagaccactctgtctgacaccgagcagagcagcgtggagtacaac
gttatcagtcttctgcaggatgcagagagtaaatcggagggaggaggccaggccatttca
gcgagggaacactttgtgttcacagacacagacggacaggtgtaccacatcactgtcgag
gggaataccgtcaaagacggtgcccgcatccccccagacggcagtatgggtagcattgcg
tgcatcgcctggaagggagacactctggttctcggtgatgtggacgggaacctcaacttc
tgggacctcaaggcccgtctctccaggggaatccctactcaccgtggttgggtgaagaag
atccgttttgcccctgggaaagggaaccagaagctactggtcatgtacacagatggggca
gaagtctgggacaccaaagaggtgagcatggtgagcagcctgcggattggtcggaacgtg
aactaccgtatcctggacattgactggtgcacctcggacaaggtggtgttagcctctgac
gacggctgcatccgtgtgctggagatggccatgaagtctgccagctacaggatggatgaa
caggacctgactgatcctgtgtggtgtccgtacctgctgctcccccgtgctgccctcacc
ctgaaggccttcctcctgctgcagccctggtctggcaccttcaccatggacatcacacaa
gtggattacattgaaaaatatgagattaagggcctgatccaggaacagctcaactccatg
tccaatgacatgaagagcgtcctgcttgatcccgagctcaacctgctgcaacgctgcctc
cttgtgtctcggctgtttggggacgagtcggacctgcagttctggacggtggcggcccac
tatctccagtcattcgcccaggcccgccacctcagtgtgcccgtccccgagggccagacc
ccagccgaggggactcaggccaccccacagggccacctggacatctaccacgacaccctg
tgtgagagcttctacttccagaggttccagttggagcgagtccatctacaggaggtgaag
aggtccagttatgaccacaccaagaagtgtgctgaccagctcctcctgctgggacagacg
gaccgagcggtgcagttgctgttggagactagtgctgacaaccccagttactactgtgac
tcgctgaaggcgtgtctggtgaccaccattacctcctcagggccctcccagagcaccatc
aaactagtggccaccaacatgatcgccaacggcaagctggcagagggggtgcaactgctg
tgtttgattgacaaggctgcggacgcatgccgatacctgcagacttatggggagtggaac
cgtgctgcctggctggctaaggtgcgtctgaacccggcagagagctcagacgtgctaaag
cgttgggcagagcacctctgctccccccaggtcaaccagaagtctaaggccatcctagtg
ctgctctccctgggctgcttccataaagtaggagagatgctccaaagcatgaggtacttt
gaccgcgcggcgctcttcattgaagcctgtctgaagtacggggtgatggaggccaacgat
tccaccaataagctgatcggggctgcgttcgtggactacgcccgactgctgcgcaacctg
ggcctgagggagagcgccgcgttctgggcatcgcgggcagggggcgccggagagcagctg
ctggaggaactcttccagggagaggaggcagtgccagaggctgtacccggggaggaggaa
acggagggcctggagaacaccgagtga
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integrated database retrieval system