Coregonus clupeaformis (lake whitefish): 121553751
Help
Entry
121553751 CDS
T08357
Name
(RefSeq) serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B delta isoform
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03015
mRNA surveillance pathway
cclu04261
Adrenergic signaling in cardiomyocytes
cclu04382
Cornified envelope formation
cclu04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
121553751
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
121553751
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
121553751
09158 Development and regeneration
04382 Cornified envelope formation
121553751
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cclu01009
]
121553751
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cclu03019
]
121553751
03036 Chromosome and associated proteins [BR:
cclu03036
]
121553751
Protein phosphatases and associated proteins [BR:
cclu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
121553751
Messenger RNA biogenesis [BR:
cclu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
121553751
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
121553751
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_Prp19
WD40
Beta-prop_WDR5
WD40_CDC20-Fz
Beta-prop_IFT122_1st
WD40_WDHD1_1st
WDR55
Beta-prop_EML_2
Beta-prop_WDR3_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_IFT140_1st
DSE1_N
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
Beta-prop_HPS5
WD40_MABP1-WDR62_1st
Motif
Other DBs
NCBI-GeneID:
121553751
NCBI-ProteinID:
XP_041723050
LinkDB
All DBs
Position
37
Genome browser
AA seq
447 aa
AA seq
DB search
MAGVAGGNDFQWCFSQVKGAIDEDVAEADIISTVEFNHSGELLATGDKGGRVVIFQHEQE
CKNRPHLRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQQNSAHFLLSTNDKTIK
LWKIGERDKRAEGYNLKDEDGRLRDPFRITSLRVPVLMPMDLMVEASPRRVFANAHTYHI
NSISVNSDHQTYLSADDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAECHPNQCN
VFVYSSSKGTIRLCDMRTAALCDRHTKFFEEPEDPSSRSFFSEIISSISDVKFSHSGRYM
MTRDYLSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSAIMTG
SYNNFFRMFDRNTRKDITLEASRECSKPRATLKPRKVSTGGKRKKDEISVDSLDFNKKIL
HTAWHPKENVIAVAATNNLYIFQDKIN
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atggcaggagttgccggtggaaatgattttcagtggtgtttctcacaagtgaagggagcg
atagatgaagatgttgcagaagctgatatcatctcaacggttgaattcaaccattctgga
gagttgctagcaactggagacaagggaggcagagttgtcatatttcaacatgaacaggag
tgtaagaatcgaccacacctgcgaggggaatacaacgtttatagcacttttcagagtcac
gaacctgaatttgactacttgaaaagtttagaaattgaggaaaaaattaacaaaataaga
tggttaccccaacaaaactcagctcactttctactctcaacaaatgacaaaacgatcaaa
ttgtggaaaatcggtgaacgagacaagcgggctgagggttacaacttgaaagacgaagac
ggacgtctcagggatccctttagaattacctccctccgggtaccagtgctgatgcccatg
gatctcatggtagaagcaagtcctcgtagggtgtttgccaacgctcacacgtatcatatt
aattcaatttctgtaaatagcgatcatcaaacgtacctctctgctgatgatctaagaatt
aatctatggcacttggaaatcacagaccgaagttttaacattgtagacatcaagcctgcc
aacatggaggaactgacagaggtgatcacagcggctgagtgccatccaaaccaatgcaat
gtatttgtgtacagcagtagcaaaggcaccatacgcctctgtgacatgcgaacagcagca
ctctgcgataggcacaccaagttctttgaggagcctgaggatccaagcagcaggtcgttt
ttctctgagatcatctcgtccatctctgacgtgaagttcagtcacagcgggcgctacatg
atgacacgggactacctctccgtcaaggtgtgggacctcaacatggaaaacaggccagtc
gagacgtatcaggttcacgaataccttcgcagcaagctttgctcgttgtatgaaaatgat
tgcatcttcgacaagtttgagtgctgctggaacggtagcgacagtgccatcatgaccggc
tcctacaacaactttttccggatgtttgaccggaacaccaggaaggacattacactggag
gcctccagggagtgcagcaaaccgcgggctacactcaaaccccgcaaagtctccaccggt
ggcaagaggaagaaagatgaaatcagcgtggacagcctggacttcaacaagaagatcctg
cacaccgcctggcaccccaaagaaaacgtcatcgctgtggcggccaccaacaacctgtac
attttccaggacaagatcaactaa
DBGET
integrated database retrieval system
