Coregonus clupeaformis (lake whitefish): 121553776
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Entry
121553776 CDS
T08357
Symbol
socs5b
Name
(RefSeq) suppressor of cytokine signaling 5b
KO
K04698
suppressor of cytokine signaling 5
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121553776 (socs5b)
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul5 complex
Target recognizing subunit
121553776 (socs5b)
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Gene cluster
GFIT
Motif
Pfam:
SOCS
SOCS_box
SH2
Motif
Other DBs
NCBI-GeneID:
121553776
NCBI-ProteinID:
XP_041723091
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Position
37:9892869..9936472
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AA seq
562 aa
AA seq
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MEKVGKMWSNLRSRCQTLFHSDGAGPSTENSVVEVDSMHCVVDLGRGGNSGEAQASRASS
LSRSLLPLPMVTGGRRHNCVSDIPQIVEITIDSKDSEDARGGRGGVPMARRDSYSRHAPW
GGKKKHSCSTKTQSSMDTDRRSGRTRGATGRRERRYGVSSIQEMGDSGGGGRSLSTRSLR
QRLSDTVGLCLPLPPRRRSRSSKTPTISKRKIHLTELMLETCPFPQGSDLANKWHLIKQH
TAPVSPHSSTALLDAFDTAHPSPEDEEERLRERRRLSIEEGVDPPPNAQIHTLEALAQGS
SLYKLGPKMAPGIAEASGEARGATASCSGGGVSVQVLGGATAQLADCDSEEDSTTLCLQA
RRPKQRHASGDGNLSRNQPGPWKVHTQIDYIHCLVPDLLQITALPCYWGVMDRYEAEALL
DGRPEGTFLLRDSAQEDYLFSVSFRRYNRSLHARIEQWNHNFSFDAHDPCVFHSSTVTGL
LEHYKDPSACMFFEPLLTSPLHRTFPFGLQHLARAAICPRTTYDGIGALPLPPAMQDFLK
EYHYKQKVRVRWLEWEPPLKIK
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atggagaaagtgggcaagatgtggagcaacctgaggagccgatgccagaccctcttccac
agtgacggtgcgggacccagtacagagaacagcgtggtggaggtggacagtatgcactgt
gtggttgacctgggacggggaggcaattcaggcgaggcccaggcttctcgggcctctagc
ctgtcccgaagcctcttgccgctccccatggttactggaggacgacgtcacaactgtgtg
tcggacatcccccagatagtggagatcaccatagacagcaaagacagtgaggatgcgagg
gggggtcgtgggggagtccctatggcccggagagactcgtactcacgccatgcaccttgg
gggggcaagaaaaaacactcatgttccactaagacccagagctccatggatacagacagg
cggtcagggcgcacgcgcggggccactggccggagggagcgtcgctatggggtcagctcc
atccaggaaatgggtgactctgggggcggagggcgcagtctgagcacccgttctctgcgc
cagcggcttagcgatacagtgggtctgtgtctcccccttcccccccgccgccgctcacgc
tcctccaagacccccaccatctccaagcgcaagatccacctgacagagctgatgctggag
acctgtcccttcccccagggctcggacttggccaacaagtggcacctgatcaagcagcac
acggcgcccgtcagcccgcattcctccacggctctgcttgacgccttcgacactgcccac
ccctcccctgaggatgaggaggagcgtctgcgcgaacgccgcaggctcagcatcgaggag
ggagtggaccccccacccaacgcccagatccacaccctggaggccttggcgcagggctcc
tctctgtacaaactgggaccaaagatggcccccggcattgcagaggcctctggggaggcc
cggggcgccacggccagctgctcaggaggaggggtatcggtgcaggtgctcggaggggct
acagcccagctggctgactgtgactcggaggaggactcaaccaccctctgcctgcaggcc
cggaggcccaagcagcggcacgcgtccggggatggcaatctgagccggaaccagcctggg
ccatggaaggtgcacacccagatcgactacatccactgcctggtaccggacctgctgcag
atcactgcactgccctgctactggggcgttatggaccgctacgaggcggaggcactgctg
gatggacggcccgagggcaccttcctactgcgcgactcggcccaggaggactacctgttc
tcggtcagttttcgccgctacaaccgctctctgcacgcccgcatcgagcagtggaaccac
aacttcagcttcgacgcccacgacccctgcgtgttccactcatccaccgtcacaggcctg
ctggagcactacaaggaccccagcgcctgcatgttctttgagccactgctcacgtcgccg
ctccaccggaccttccctttcggcctgcagcacctggcacgcgccgccatctgcccccgg
accacgtacgatggcatcggcgccctgccactgcccccggccatgcaggacttcctcaag
gagtatcactacaaacagaaagtgcgcgtgcgctggctggagtgggagccgccactcaag
atcaaatag
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