Coregonus clupeaformis (lake whitefish): 121553827
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Entry
121553827 CDS
T08357
Name
(RefSeq) 4-aminobutyrate aminotransferase, mitochondrial-like
KO
K13524
4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase [EC:
2.6.1.19
2.6.1.22
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu00250
Alanine, aspartate and glutamate metabolism
cclu00280
Valine, leucine and isoleucine degradation
cclu00410
beta-Alanine metabolism
cclu00640
Propanoate metabolism
cclu00650
Butanoate metabolism
cclu01100
Metabolic pathways
Module
cclu_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
121553827
00650 Butanoate metabolism
121553827
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
121553827
00280 Valine, leucine and isoleucine degradation
121553827
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
121553827
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cclu01007
]
121553827
Enzymes [BR:
cclu01000
]
2. Transferases
2.6 Transferring nitrogenous groups
2.6.1 Transaminases
2.6.1.19 4-aminobutyrate---2-oxoglutarate transaminase
121553827
2.6.1.22 (S)-3-amino-2-methylpropionate transaminase
121553827
Amino acid related enzymes [BR:
cclu01007
]
Aminotransferase (transaminase)
Class III
121553827
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_3
DNA_ligase_IV
Motif
Other DBs
NCBI-GeneID:
121553827
NCBI-ProteinID:
XP_041723145
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Position
38:complement(4787041..4794107)
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AA seq
499 aa
AA seq
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MASSILSRHLASSLRPSLGLSASGYRHQQTTGKRVEEVEFDGPCMKTEVPGPRSKILARQ
LDGIQSVVQVNFFCDYEESKDNYLVDVDGNRMLDVFTQIASIPIGYNHPALTKVMMDPKN
MGTFVNRPALGMMPPEQFSEKLVNSLMAVAPKGFSRVQTMSCGSCSNENAYKAIFIWYRN
KMRGTPEPTPEEVRTSVINQVPGCPDLTLLSFMGGFHGRTLGCLATTHTKAIQKLDVPSF
DWPIAPFPQLRYPLDQFERENAQEEARCLEEAEDLIVKWNQKGRHVAGVVIEPIQAEGGD
NHASFDFYRKLREITKKHGCAFLVDEVQTGGGSTGKFWAHEHWGLDDPADIVSFSKKMLT
GGYYQKDSFQPDKPFRIFNTWLGDHTKNLLLTEVIKVIKTENLLDQAKRSGKVMLEGLYD
LQNKYPHLLSRARGIGTFCAIDVKDEDTRNSLILKARNKGVVLGGCGTQSIRFRPALVFK
EHHAHLFLDIFNDAIAELK
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atggcctccagtattctgagccgccatcttgcgtcctctctgagacccagccttgggttg
tctgcttcaggataccgccatcaacaaacaacaggtaaaagagttgaggaagttgagttt
gatggtccttgtatgaagactgaggttccagggcccagatctaagatcctagcacgacaa
ctggatgggattcagagtgtggtccaggtgaacttcttctgtgactatgaggagagtaaa
gataactacctggtggatgtggatgggaaccgcatgctggatgtcttcacccagatcgca
tccatacccataggatacaatcacccagcactcacaaaagtaatgatggatccgaagaat
atgggaacgtttgtcaaccgaccagctcttgggatgatgccaccagagcaattctctgag
aagcttgtcaacagcctgatggcagtggcgcccaagggcttcagcagggtccagaccatg
tcctgcggatcctgctccaatgagaacgcttacaaagccatcttcatctggtacagaaac
aagatgagaggaactccggaaccaactcccgaggaagtaagaaccagtgtcatcaaccag
gttcctggctgccctgacctgactcttctgtccttcatgggcggatttcacggaagaact
ctgggctgcctggccaccactcacaccaaggccatccagaagctcgacgtgccgtctttt
gactggcccatcgcccccttcccccagctgaggtaccccctggaccagttcgagagggag
aacgcacaggaggaggcccgttgcctggaggaggcggaggacctgatagtgaagtggaat
cagaagggtcggcacgtggcaggggtggtgatcgagccaatccaggcagagggaggggat
aaccacgcctccttcgacttctacaggaagctcagggaaatcaccaagaagcatggctgt
gccttcctagtggatgaggtgcagacagggggcgggtctacggggaaattctgggcccac
gagcactggggattggacgaccccgctgacatcgtctccttcagcaagaagatgttgaca
ggagggtactaccagaaagacagctttcagcctgacaagccgttcaggatcttcaacacg
tggcttggagaccacactaagaacctgttgctgacagaggtcataaaggtcatcaagaca
gagaacctgctggaccaggccaagaggtcaggcaaggtcatgctggagggactctacgac
ctacagaataagtacccccacctgctcagtagagcgaggggcatcgggacgttctgtgcc
atcgatgttaaggatgaagacacacgcaacagcctcatcctcaaggccaggaataagggt
gtggttctagggggctgtggaacccagtctatccggttccgaccagctctagtgttcaag
gaacaccatgctcatctcttcctggatatctttaatgacgctatcgctgagctcaagtag
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