Coregonus clupeaformis (lake whitefish): 121553851
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Entry
121553851 CDS
T08357
Name
(RefSeq) LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal hydrolase 43
KO
K11856
ubiquitin carboxyl-terminal hydrolase 43 [EC:
3.4.19.12
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cclu01002
]
121553851
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121553851
Enzymes [BR:
cclu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
121553851
Peptidases and inhibitors [BR:
cclu01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
121553851
Ubiquitin system [BR:
cclu04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
121553851
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
121553851
NCBI-ProteinID:
XP_045061417
LinkDB
All DBs
Position
20:35966203..36025454
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AA seq
987 aa
AA seq
DB search
MGGGEESPVSGPAAAHQPGTRHSFVQDHFQAQYRSSLTCPHCLKQSNTFDPFLCISLPIP
LRQTRCMSVTLVLSTKGQRYIRVGLAVPLIGSISCLRAMVAEEGKITPDQVILSELYATG
FQRSFSDDDDLTSVAESDVVYAFQAPPLHTRGGSTRISGYHHSLPSSPYTSGPEGQRLPP
STTLSSEFLNHSGSTKVLLVICNTAGSGQQAVRFGPPFLMREERTLSWDQLQQSILSKLY
YLMLNGSQAQNAGLLFKIRVVGGSASYSYLSPQDGRPLFHPAVDRALKLCGPGGPPHVKL
VIEWEHKIKECLFGNIQEEVVKDSESVRVQQQQHLQQHSCTLDECFQLYTKEEQLAPDDA
WKCPHCKQLQQGMVKMSLWTLPDILILHLKRFRQVGERRNKLSTQVRFPLAGLDMAPHVV
KRSQSMRNLGNLGPWPPTWKQPGGSSHHISHPDMALPPDFLYDLYAVCNHHGGMHGGHYT
AYCRNSVDGQWYSYDDSSVDLVPEEEVCTRGAYILFYQRRNVIPPWSASSSIRGSTSSSM
SDHWLVRLNGDSKRGSLVSRSSTTCPSSVPDSPESPVFLDDPPREEKGGFESRPFVRGIQ
GRSVSMRTPTKNKETLNKVLPLRWSFGSKDRRKTAAEPAPAPIPTPAPVELVEYLESGRR
PRCTKDSIVNLMTGSESKQGSAISSPSVGSTNLNCMGQPESPQMPEGQRRPVTDKTGSLR
RSSKGSQQQQRDQRDEGRMGSGSSTNTLTRRSTKKSKEKDQGKLQEAQSRRGSSAGFQPS
SSTHSLRDRDWEGTLRRGAKGNQDPPPGDRLVPPEGEKTRKGEKVEEASKSHEGLLSFFK
SNFKKKDKESSSSRKSDSGKVGDVGRSSTSRLSLSSGDPGGATKTGEAKPNGAPRNGGAN
CLGDELPNGKARRAADIKRSQSSSNIPSKEESSMRRTASLHRNGLSHGVAPPPRSLTAEK
PSYGTLQKTRYSTTSLGRKRTVPESSF
NT seq
2964 nt
NT seq
+upstream
nt +downstream
nt
atgggtggaggggaggagagccctgtctccggcccagcagcagcacaccagcctgggacg
cggcacagcttcgtccaggaccactttcaggcacagtacaggtcctccctgacatgtcca
cattgccttaaacagagcaacacctttgaccccttcctctgcatctcactgcccattccc
ctacggcaaaccaggtgtatgagtgtgaccctggtgcttagtactaagggtcagaggtat
atacgtgttggtctggctgtgcctctcattggctccatctcctgcctgcgtgccatggtg
gctgaggagggcaagatcacgccagaccaggtgatcctgtcagagctctacgccaccggc
ttccagcgttcgttctctgacgacgacgatctgaccagcgttgccgagagcgatgtggtc
tatgccttccaggctccgcccctccacacacggggaggctccacgcgaatctcgggctac
caccacagcctcccatcctctccgtacacctctgggccagagggtcaaaggttaccccca
tcgaccactctgtcctcagagttcctgaaccacagtggttccaccaaggtcctcctcgtc
atctgcaacacagcaggctctggccagcaggccgtcaggttcggccctcccttcctcatg
agagaggagcgtaccctgtcctgggaccagctccagcagagtatcctcagcaagctctac
tacctgatgctgaacggatcacaggctcagaatgcagggttgctgttcaagatcagagtg
gtgggaggatctgcctcctacagctacctgtccccacaagatggacgccctctcttccac
cctgccgtggacagagccctgaagttatgtggcccgggaggaccaccccatgtgaagctg
gtgattgagtgggaacacaagatcaaagaatgtctgtttggtaacatccaggaggaggtg
gtgaaggactcagagagtgtgagagtccagcagcagcagcacctgcagcagcacagctgt
accctggacgagtgctttcagctctacaccaaagaggaacagctggccccagacgacgca
tggaagtgtccccactgtaagcagctccagcagggcatggtgaagatgtccctgtggacc
ctccccgacatcctcatcctccacctcaaacgcttccgacaggtgggcgagcggcgcaac
aagctgtccacccaggtgcgcttccccctggccgggttggacatggccccccacgtggtg
aagaggtcccagagtatgaggaacctggggaacctgggaccctggccccccacatggaaa
cagcctggaggcagcagtcatcatattagtcacccagacatggccctgcctcctgacttc
ctctatgacctctatgcagtgtgtaaccaccatggtgggatgcacggtggacattacaca
gcatactgcaggaactcagtggacggccagtggtacagctatgatgacagcagtgtggac
ctggtgcctgaggaggaggtgtgtaccagaggggcctacatactgttctaccagagacgt
aacgtcatccccccctggtccgccagcagctcaatcagaggctccaccagctcctccatg
tcggaccactggctggtccgtctgaatggggacagtaagaggggtagtctggtgtcccgc
tcctccaccacctgcccctcctctgtccccgactccccagagtcccccgtcttccttgat
gacccccccagagaggagaaaggtggttttgagagcaggccgttcgtacggggcatacag
ggtcgtagcgtcagcatgaggacccccactaagaacaaagagacactgaacaaggtcctc
ccgctacgctggtcgttcggctccaaggaccgccgaaaaactgcagccgagcccgcccct
gctcccatccccacccctgcccctgtggaactggtggagtacctagagtctggaagaaga
cctcgctgcaccaaggactctatagtcaatttaatgacgggctctgagagcaagcaggga
tctgccatcagctcccccagtgtgggaagcactaacctgaactgcatgggacaaccagag
tctccgcagatgccagagggccagagaagaccagtcacagacaagacagggagtctgaga
cgaagtagcaaagggtcccagcagcagcagagagaccagagggacgagggtaggatgggc
agtggtagtagtactaacactctgaccaggaggagtaccaagaagagtaaggagaaagac
cagggaaagctccaggaggcccagtctaggagggggtctagtgcaggcttccagcccagc
tccagcacccacagcctcagggacagagactgggaaggcaccctgaggaggggtgccaag
ggcaaccaggacccaccaccaggggaccgccttgtaccacccgagggagaaaagaccagg
aagggtgagaaggtagaggaggcctccaagagccacgaggggctgctgtctttcttcaag
agcaacttcaagaagaaggacaaggagtcgtcatcttctcgcaagtccgactctggaaaa
gttggcgacgtcggcaggtccagcacctcccggctgtccctgtccagtggagacccaggc
ggggccacgaagacaggggaggcgaaacccaatggagccccccgcaacgggggtgccaat
tgtctcggagacgagctgcccaacggtaaagccagacgtgccgccgatatcaaacgctcc
cagagctcgtccaacatccccagcaaggaagagtctagcatgcgaaggaccgcctcttta
caccgtaacgggctgtcccatggcgtggctccgccccctcgcagcctcacagccgagaag
ccctcctacggtaccctgcagaagactcgctatagtaccacctcactgggacgcaagagg
acggtccccgagtccagcttttag
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