Coregonus clupeaformis (lake whitefish): 121553920
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Entry
121553920 CDS
T08357
Name
(RefSeq) nuclear factor 1 X-type isoform X1
KO
K09171
nuclear factor I/X
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121553920
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Other basic domains
NF-1
121553920
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Gene cluster
GFIT
Motif
Pfam:
CTF_NFI
NfI_DNAbd_pre-N
MH1
Motif
Other DBs
NCBI-GeneID:
121553920
NCBI-ProteinID:
XP_041723248
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Position
20:63825115..63979049
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AA seq
579 aa
AA seq
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MATDTYLVNEDPSRGPGMPECFLVSDSYRDEFHPFIEALLPHVRAFSYTWFNLQARKRKY
FKKHEKKMSKEEERAVKDELLGEKSEIKQKWASRLLAKLRKDIRPEFREDFVLTITGKKA
PCCVLSNPDQKGKIRRIDCLRQADKVWRLDLVMVILFKGSPLESTDGERLAKSPQCSNHG
LCVQPHHIGVSVKELDLYLAYFVQAPESGQSDSSSQQGDTDIKPPPNGHLSFQDCFVTSG
VWNVAELVRVSQTPVATASGPNFSLADLESPGYYNINQVALGRRSLASPPSTRYMSEVEL
YANLPRSSNKRKSLDDSELESPTDDVFYPGRSPAAGSSQSSGWPNDMDAGGDLHSPSPSS
HHVDRHLIMQHHLASVQERKIKHEHDGVQFPYHGLSSPGSLKKPGKFDFNALSPQTRSPR
MTFTHHPLPVLAGVRPGSPRASASALHFPSSSIIQQSSPYFTHPTIRYHHHQDPLKEFVQ
FVCADGSGQSGGQPNGGGHSQSKMPGSFLLPPPPPVARPVPLPMPDSKPINTPPDGGGLS
SPASPSYSTPGSTAPNRFVSIGARDNFLNLPQQSQSWFL
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atggccactgacacgtacctggtgaatgaagatccttccagaggccccgggatgcccgag
tgttttctagtgtctgattcctacagggatgaattccacccgttcatcgaggccctgctg
ccccacgtccgagcattctcctacacatggttcaacctgcaggcccgcaagcgcaagtac
ttcaagaagcacgagaagaagatgtccaaggaggaagagcgcgcagtcaaagacgaactg
ctgggagaaaaatctgagatcaaacagaaatgggcgtcgagactccttgccaagctccgc
aaggacatccggccagagttccgggaggactttgtcctcaccatcacagggaagaaagcc
ccctgctgcgtgctctccaaccccgaccagaagggcaagatcaggaggatcgactgtctc
cgccaggctgacaaggtgtggaggctggacctggtgatggtcatcctattcaagggaagc
cccctggagagtacggacggagagcggctggccaagtcgccccagtgctccaatcacggc
ctgtgtgtccagccgcatcacatcggggtctccgtcaaagagctggatctctacctggcc
tactttgtccaggcaccagaatctggacaatcagacagctccagccaacaaggagacaca
gacatcaagccaccgcccaatgggcacctgagtttccaggactgcttcgtcacctcagga
gtgtggaacgtggctgagctcgtcagggtgtcacagactcctgtagccacagcgtctggt
cctaacttctccctggctgacctggagagtcctggctactacaacatcaaccaggtggct
ctggggcgacgctcccttgcatcccccccttccaccaggtacatgtctgaggtcgagctg
tacgcaaaccttccacggagctcaaacaagaggaagtcgttagacgacagtgagctggag
agccccacggacgacgtcttctaccccggacgctcccccgccgcaggctcctcccagtcc
agcggctggcccaacgacatggacgcaggtggagaccttcattccccatccccaagctca
caccatgttgaccgtcacctgataatgcagcaccatttggccagtgtgcaggagaggaag
ataaaacatgaacacgatggagtgcagtttccttaccatggactgtcctcgcctggttct
cttaagaagccggggaagtttgatttcaacgctctgtcgccccagacgaggtccccccgc
atgacgttcacacaccacccgctgcccgtgctggcaggagtgagaccagggagtccccgt
gcctcagcgtcagctctccacttcccctcctcctccatcatccagcagtccagtccctac
ttcacccaccccaccatccgctaccaccaccaccaggacccgctcaaggagtttgtccag
ttcgtctgcgccgacggctcggggcagtccggaggacagcctaacggaggtggccacagc
cagagcaaaatgccaggctccttcctgctgcccccgccgcccccagtggcgcgccccgtg
cccctccccatgcccgattctaaaccaatcaacacgccccccgacggcggcggactcagc
tcgcccgcatctccgtcatactccacgccaggctccacagctcccaacaggtttgtcagc
atcggagcacgggacaactttctgaacctcccccagcagtctcagtcttggttcctctga
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