Coregonus clupeaformis (lake whitefish): 121553950
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Entry
121553950 CDS
T08357
Symbol
cfap52
Name
(RefSeq) cilia- and flagella-associated protein 52
KO
K24728
cilia- and flagella-associated protein 52
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cclu03037
]
121553950 (cfap52)
Cilium and associated proteins [BR:
cclu03037
]
Motile cilia and associated proteins
Other motile cilia associated proteins
121553950 (cfap52)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
EIF3I
WDR90_beta-prop_4th
WD40_like
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_CAF1B_HIR1
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_RIG_2nd
Beta-prop_SCAP
Beta-prop_NWD2_C
Beta-prop_SPT8
Beta-prop_VPS8
Beta-prop_Vps41
Beta-prop_NOL10_N
WDR54
KNTC1_N
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
121553950
NCBI-ProteinID:
XP_041723287
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Position
29:complement(61396594..61422922)
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AA seq
441 aa
AA seq
DB search
MRVWELDLPNRKIRPTECQTGQLKRIVKCIEIPDDDHFFYCGTTSGDILKVNLKTRLLNS
CGPRKQKFSKGVNTLKVLNSGDILVGSGDGMFTLCSGANFKTIKKVQLEGGVTSIAVRGE
GHQFFAGTEASQIYRFGYTDFKEELIATSHNSAVKDVAFPFGSSELFATCSQDDIRVWHA
ETSKELLRISVPNMTCNALDFMIDGHSIISAWNDGKIRVFAPETGRAMLVIHNAHSMGVT
AIAGTRDCKRIISGGGEGQVRVWEILQGCHRLIETMKEHKATVTSIKIKSNDKEYVTASS
DGACIIWDLVRFVRNQMVLANTLFRSVCYHPEEYQIITSGTDRKIGYWEVYDGSAIRELE
GSLSGAINGMDISQDGQHFVTGGDEKLVKVWDYSEGEVTHVGVGHSGSITSVKISSNNRS
MVSTSVDGAVLRWRYPHPSSP
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgtttgggagctagaccttccaaataggaagatccggcctacggaatgccagaca
ggacagctgaagaggattgtcaaatgcattgagatcccagacgacgaccatttcttttac
tgcggaaccaccagtggtgacatcctgaaggtcaacctgaagacccgcctcctcaacagc
tgtgggccacgaaaacagaaattcagcaagggtgtgaacacactgaaggtgctgaattct
ggggacatcctggtgggctctggggatggcatgttcactttgtgctcgggagctaacttc
aaaaccatcaagaaggttcagttggaggggggagtgacgtccatcgctgtgagaggcgag
ggccaccagttctttgcagggacggaggcgtctcagatctaccgttttggctacacagac
ttcaaagaggagctgatcgccaccagtcacaacagtgccgtcaaagacgtggccttccct
tttggttcgtctgagctatttgccacgtgttcccaggatgacatcagagtgtggcatgcc
gagacctccaaggagctgctgcggatctccgtgcccaacatgacctgcaacgccctggac
ttcatgatcgacggacacagcatcatcagcgcctggaacgatgggaagatccgtgtgttt
gccccggagactggcagagccatgctggtcatccacaatgcccacagcatgggcgtgacg
gccatcgctggcaccagggactgcaagaggatcattagtggaggaggagagggacaggtg
cgtgtgtgggagatcctgcagggctgtcaccggctcattgagaccatgaaggagcacaaa
gccaccgtcaccagcatcaagatcaagagcaacgacaaggagtatgtcaccgccagctct
gacggggcctgcatcatctgggacttggtgcgttttgtgaggaatcagatggtcctggcc
aacactctgttcagaagtgtctgctaccaccctgaggagtaccagatcatcaccagtggc
accgacagaaagattggttactgggaggtgtatgacggctcagccatcagagaactggag
ggctccctgtcaggagccatcaatggcatggacatctcacaggacggacagcactttgtc
actggtggagacgagaagctggtgaaggtgtgggactactcggagggcgaggtgacccac
gtgggcgtcggccacagcggcagcatcaccagcgtcaagatctcttccaacaacaggagc
atggtgagcaccagtgtcgacggggccgtgctccggtggaggtacccccacccctcctcc
ccctag
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