Coregonus clupeaformis (lake whitefish): 121553951
Help
Entry
121553951 CDS
T08357
Name
(RefSeq) sal-like protein 3
KO
K19871
sal-like protein
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121553951
03036 Chromosome and associated proteins [BR:
cclu03036
]
121553951
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
121553951
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
121553951
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
zf-C2H2_jaz
zf-met
zf-C2H2_6
zf-C2H2_11
zf-H2C2_5
NOA36
Zf-C2H2_ZNF451_C
zf-C2H2_15
UBZ_FAAP20
Zf-C2H2_ZNF451
zf-Di19
Motif
Other DBs
NCBI-GeneID:
121553951
NCBI-ProteinID:
XP_041723288
LinkDB
All DBs
Position
38:2623053..2633466
Genome browser
AA seq
1248 aa
AA seq
DB search
MSRRKQAKPQHLNSDEEALQTDVASQHAQLEGMDKEERHSNSEETHVCEKFAEFFTWAEL
YEHQRSSTEDPAQVLIVKEDEGMPGPEGSQAGSSRTPSLALLSLAPSNSADIIESVDWGL
ELVEPVNDNDNDSTDMLEEMNMGEREDESMEMEQQHHDKHKSSGPQNPPERTELAIPSFQ
SSAVTNSMPSTNVTLEILHSTQVAVAQFSQSLHSSGAGGKAATAAILVILEHLLALQQQQ
VHQLHLIEQIRSQVVSRALSLAPNPFPSQGLIAPPVLPQYGTIPSAVNGQVSVSLASVLE
RSHTLTSQTSYGQAHTRDVICTSAPSDNSAPPPTSCNNISLLQPTYTGSHTSGSCTQTQT
SSSPLSMQGQSNSLLSSPSSLPFLPQSPPSSVIFPNPLAKITATTNALDPFSVLMKHHRN
GKLPNVSMFDTKPSPEQPFFKHKCRFCAKVFGSDSALQIHLRSHTGERPFKCNICGNRFS
TKGNLKVHFQRHKEKYPHVQMNPYPVPEYLDNGMSFPPEKPAATWLDSKPVLAPSMGLQL
PSTLTTMGSSSDFLSVTLSIKSPFRPSPDSSECVSLSPNTTGNETSVPTALESPQSNQEG
EASNVLKAEEMHLPQICTTKPRVSPITVTTSTAMTMTTSTPEPSAPTSPVSNSSPLSLAS
DLFKAKFPFGGLLDSMQTSETSKLQQLVENIDKKITDPNQCVLCHRVLSCQSMLKMHYHI
HTGEMPFQCKVCGRAFTTKGNLKTHIGVHRANPPHRVQHSCPICQKKFTNAVVLQQHLHM
HMGSQILNSPLMDGLQDLDIDLSFHEKNFDSLSNYDNDLMDDNSMEEDDEEEEEEEEEEE
EEEKEEEEEKEEEGVDPLKPLSSVCSSPPYSDAVVSSIAAPENQMKMIDSTINLNHSFGL
KSMMNGCMDSERCAAIHSSTVGEGQNHNAAGSPTVSESSTHMHVPVSPAQSNSEVHLCKS
LSGKHSGESQEITASVKSEQSDSPTLTPVLENGVALDLRERGASQSIPGLVTSIVPRMIK
SEMNGYHRPMNFNEGLHHPFGLPVPATPPSLVSPGITSLLGPPQPRRTPKQHNCHTCGKN
FSSASALQIHERTHTGEKPFGCTICGRAFTTKGNLKVHMGTHMWNNAPARRGRHLSVENP
MVLLGGEAAMKFGEMFQKDLTAQAMNVDTGFWNHYTEALTNGLAMKNNEISVIQNGWIPQ
LHAMTAGTDRVSTGGSPPMTSLGKTAMDLGINRYFSMLIDDSKKIGIN
NT seq
3747 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgccgcaagcaagcgaagccacaacatctcaactcggacgaagaagcgttgcaa
actgacgtcgcatcacaacatgcacaattggagggaatggacaaggaggagcggcacagt
aacagtgaagaaacgcacgtgtgtgaaaaatttgctgagttcttcacctgggccgaactg
tatgagcaccagagaagctccacagaggacccagctcaggtcctcattgtgaaggaagat
gaggggatgcctggacctgagggatcccaagctggatcctcccgaacccccagcctggcc
cttcttagcctggcccccagcaactcagcagacattattgagtcagtggactggggcctt
gagctggtggagcctgtgaatgataatgataatgacagcacagatatgttagaggagatg
aacatgggagagagggaggatgaatccatggagatggagcagcagcaccacgacaaacat
aagtcatctggcccccagaatcccccagaaagaaccgagttggccatcccttcatttcag
tcgtccgctgtgaccaacagcatgcccagtacgaacgtaacgctggagatcctccacagt
acccaggtggctgtggcccagttctcccagagcctccacagtagtggggcaggagggaag
gcggccacagcagccatcctagtgatcctggagcacctgctggctttgcaacagcaacag
gtccaccagttgcatcttattgagcagatccgtagccaggtggtctccagggccctatca
ctggcaccgaaccctttcccctcccaaggtctcatcgctccccctgtcctaccacagtat
gggacgataccctctgccgtcaatggacaagtgtctgtgtctttggcatctgtgcttgag
aggtcccacacactcacctcacaaacttcatatggacaggcccacacgagagatgttata
tgtacctcagctccctcggacaactctgcccctccccctactagctgcaacaatatttcc
ttattacagcctacctacacgggttcacatacaagtggtagctgtactcagacccagaca
tcgtccagcccactgtccatgcagggtcagagcaacagtctcctcagctcaccatccagc
ctgccgtttctacctcagagcccccccagcagtgtcatcttccccaaccccctggccaaa
atcacagccacgactaacgctctcgaccccttctctgtcctgatgaagcaccaccggaat
ggcaagctgcccaatgtgtccatgtttgacaccaagcccagccctgagcagccctttttc
aagcataagtgcaggttctgcgccaaagtgtttggcagcgacagcgcgctgcagatccac
ctgcgctctcacactggggagaggcccttcaaatgcaacatctgtggcaatcgcttctcc
acgaaagggaacctgaaagtccacttccaaagacacaaagaaaagtatccccatgttcag
atgaacccttatccagtgccagaatatttagacaatggaatgtcattccctcctgaaaaa
ccagcagccacttggctggatagcaagcctgttttagcgccctctatgggccttcagctt
ccctccactctcactactatgggaagctcaagtgactttctaagtgtcacactatccatc
aaatccccttttaggccctccccagactcaagtgaatgtgtgtctttgtcgccgaacact
acaggcaatgaaaccagtgttcccacagctttagagtctccacagtctaatcaggagggg
gaagcctccaacgtcttgaaagcagaggaaatgcacctgccccaaatctgcacgactaaa
cccagggtgagtccaattactgtgacaacaagtacagccatgactatgaccacatccaca
cctgagcccagtgctccaacttcccccgtttccaactcctcaccactttccctggcctct
gacctgttcaaagccaagtttccattcggtggcctcttggactctatgcaaacgtcagag
acctcaaagctccagcagctggtggagaacatagacaagaaaataacagaccccaaccaa
tgtgtcctctgtcaccgcgtgcttagctgccagagcatgctgaagatgcattaccatatc
cacactggggagatgccctttcaatgtaaggtctgtggcagggctttcaccaccaaagga
aaccttaagacacacattggtgtccacagagcaaaccctcctcaccgggttcaacattca
tgtcccatctgccagaagaagttcaccaacgctgtagtgctacagcagcaccttcacatg
catatggggagtcagatcttaaactcaccgttaatggacggcctgcaggacctggacatt
gatctctccttccatgagaaaaactttgacagcctgagtaactatgacaatgacctcatg
gatgacaactccatggaggaggatgacgaagaagaagaagaagaagaagaagaagaagaa
gaagaagaaaaagaagaagaagaagaaaaagaagaagaaggtgtagatcccctcaaaccc
ctgagctctgtctgtagttctcctccctactctgatgctgttgtctccagcatagctgca
ccggagaaccaaatgaaaatgatagactccaccataaacctaaaccactcctttgggcta
aagtcaatgatgaatggatgtatggacagtgaacgctgcgctgctatccactcctctaca
gtgggagaaggacagaatcacaatgcagccggcagcccaaccgtgtctgaatcgtccacc
cacatgcatgtaccagtgtcacctgcacaaagcaactctgaggtccacctctgcaaatcc
ctgtctgggaagcacagtggagaatcccaagagatcacagcctcagtgaagagtgagcaa
tctgattcgcccaccttgactccggtactggaaaatggagtggccctggatctgagagaa
cgtggtgccagccaaagcattcctggcctggttaccagcattgtgccaaggatgatcaaa
tctgaaatgaatgggtaccatcgaccaatgaacttcaacgaggggctgcatcatccattt
ggcctcccggttcctgccactcctccatctctggtgagcccaggaatcacctctctgctt
gggccacctcaacctcgacggacccctaagcagcacaactgccacacctgtggaaagaac
ttctcctcagccagtgctctacagatccatgagaggacccacacaggggagaaacctttt
ggctgcaccatctgtggcagggcattcacaactaaaggaaacctgaaggtacacatgggc
actcacatgtggaacaatgcaccagccagaagaggcaggcatctgtcggtggagaacccc
atggtcttgttgggtggggaagctgccatgaagttcggagagatgtttcagaaggacctg
acggcacaggccatgaacgtggacacagggttctggaaccactacacagaagctttaacc
aatggcctggccatgaagaacaatgagatctcagtgatccagaatgggtggattccacag
cttcatgccatgacggcaggaacggacagagtcagcactggaggtagcccaccaatgacc
agtctaggaaagacagccatggaccttggaattaaccgatacttttctatgttaattgat
gacagtaaaaagattgggatcaattga
DBGET
integrated database retrieval system