Coregonus clupeaformis (lake whitefish): 121553959
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Entry
121553959 CDS
T08357
Symbol
si:zfos-323e3.4
Name
(RefSeq) volume-regulated anion channel subunit LRRC8C
KO
K22038
volume-regulated anion channel
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cclu04040
]
121553959 (si:zfos-323e3.4)
Ion channels [BR:
cclu04040
]
Chloride channels
Chloride channel, volume-regulated (VRAC)
121553959 (si:zfos-323e3.4)
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Gene cluster
GFIT
Motif
Pfam:
Pannexin_like
LRR_8
LRR_4
LRR_14
LRR_5
LRR_At5g56370
LRR_R13L1-DRL21
LRR_EndoS
LRR_9
LRR_LRWD1
LRR_6
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
121553959
NCBI-ProteinID:
XP_041723298
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Position
38:5537094..5547419
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AA seq
818 aa
AA seq
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MIPVTEFRNFASSQNPEFRVLKPWWDVFSEYLCIAMLMIGVFGCTLQLTQEKISCLPSHF
SSSTPEAIDCSHIRSHRENETWEHHTLVKPVSPIIREVHGRKNNLDIHQYIFVNHYCYER
AVHWYGKYFPYLVVIHTLIFMVASSFWFKFPGTSSKIEIFVTILGKCFDSPWTTRALSEV
SEERGEEKMVIWRKNTMSKSMASAFAASPDSGPGVEEEMVGLLRQSSIKSNPEKKNPELQ
PADSLLDKKEGEQAKALFEKVKKFRTHVEEADLLYLMYVLQTSLKVFKFVLITCYSTALV
PNIEIVVRCSVPPELTGFDIYCCNHTKAHLFSKLCYCYICFVGVYGLLCIYTLYWLFHRP
LKEYSFEHVRLETGINDIPDVKNDFAFLLHLSDQYDALYSKRFAVFLSEVSESRLRQVNL
NHEWTGKKLRGRLSRNADNRQELHLFMLPGLPDTVFDVPEVESLKLELLNNVTISSSVIQ
LGSLQELSLIHCPAKLQLAALTHLRENLKVLRLAFEGLEQVPMWMYTLQSLEELHLSGPL
THELSRSATLDSLRELKALRVLTLRSRLIKIPPSVGDVAVNLQRLCIYNEGLKLQAFSSL
KKLTNLASLELTGCELERIPSAVFSLSSLQELDLKENKLTTVEEILSLQHCRRLVTLRLW
HNSITYIPEHIAKLKSLETLNVSWNKLRKLPSRLFYCTKLRHLNLTHNQLTSLPAEVGIL
QSLQFFSAAFNSLEQLPEELFSCKRLKTLALGNNCLLSLSPRVANLAQLVRLELKGNRLE
SLPSEIGDCPLLKTSNLVVEDNLLDLLPSDVRSRMKDS
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atgataccagtaactgagtttcggaactttgcctcatcacagaacccagagttccgggtt
ctaaagccatggtgggacgtgttctcggaatacctatgtatcgccatgctcatgatcgga
gtgttcggatgcaccttacagctcacccaggagaagatctcctgccttcccagccatttc
tccagctcaactccagaggccatcgactgcagccacatccgcagccacagggagaacgag
acatgggagcaccataccttagtcaagcccgtcagccccatcatccgggaggtgcacgga
cggaagaacaaccttgacatccaccagtacatcttcgtcaaccactactgctacgaacgg
gccgtgcactggtatggcaagtacttcccctacctggtggtaatccacacattgatcttc
atggtggccagcagcttctggtttaagttccctgggacgtcgtccaagatcgagatcttt
gtcaccatcctggggaagtgtttcgactcgccgtggaccacccgggcactgagtgaggtg
tctgaggagcgtggcgaggaaaagatggtgatatggaggaagaacaccatgtcgaagtcg
atggcatcagcgttcgctgcctcgccggacagtgggccaggggtggaggaggagatggtg
ggacttctccggcagtcgtccatcaagtcaaatccagagaagaagaacccggaactacag
ccagcagattccctcctggacaagaaggaaggggagcaggctaaagctctgttcgagaag
gtgaagaagttcagaacgcatgtggaggaggcggatctgctctacctgatgtacgttctc
cagacctccctcaaggtcttcaagttcgtcctcatcacctgttacagcaccgcattggtc
cccaacattgagattgtagttcgttgctcagttcctccggagctgaccggcttcgacatc
tactgctgcaaccacaccaaagcccacctcttctccaagctgtgttactgttacatctgc
tttgtgggagtctacggacttctgtgcatctacaccctctattggctcttccatcgacct
cttaaagagtactcctttgagcatgttcgactggagacgggcatcaacgacatcccagac
gtcaagaacgactttgcgttcctcctccacctcagcgaccagtacgacgcgctctactcc
aaacgcttcgctgtcttcctctccgaggtcagcgagagccgtcttcgccaggtcaacctc
aaccacgagtggaccggtaaaaagctccggggccgcctctcccggaatgctgacaaccgc
caggaactccatctcttcatgctcccaggtctccccgacaccgtctttgatgtccctgaa
gtggaatctctcaaactggagctgctaaacaatgtgactatttcctccagtgtgatccag
ctaggttctctccaggagctgtccctcatccactgccctgccaagctccagctggctgcc
ctgacccacctcagagagaacctcaaggtcctccggctagcctttgagggcctggagcag
gtaccaatgtggatgtacacacttcagagtcttgaagagctccacctgagtggtccgttg
acccacgaactctcccgcagtgcaaccttagactccctgagagaactcaaagctctaaga
gtcctgacgcttcgcagccgcctaatcaagatccctccgagtgtcggggacgtggcagtc
aacctccagcgtctctgcatctataatgagggcctcaaactccaagccttcagcagcctg
aagaagttaaccaacctggcctctctggagctgacaggatgcgagctggagcgcatcccc
agcgcggtcttcagcctatcaagcctgcaggagctggacctgaaggaaaacaagctgact
acagtagaggagatcctgagtctacaacattgccggcgcctggtaactcttcgtctctgg
cacaacagcatcacctacatccctgagcacattgctaagctgaagtccttagagacgctg
aacgtcagttggaacaagctccggaaacttccgtcacgtctcttctactgcaccaagctc
cggcacttgaacctgacccacaaccagctcacatcgctaccagccgaggtagggatactc
cagagtctccagttcttctcagcagcctttaactccctggaacagctgccggaggagctg
ttctcctgcaagaggctcaagaccctggcgctgggaaacaactgcctgctctcgcttagc
cccagggtggctaacttggcccagctagtgcgcctggagctcaaggggaacaggctagag
tctctaccctcggagataggggattgtcccctgttgaagaccagtaatcttgtggtagag
gacaacctgctggatctactgccgtcggatgtacggagcaggatgaaagacagttga
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