Coregonus clupeaformis (lake whitefish): 121553962
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Entry
121553962 CDS
T08357
Name
(RefSeq) rhomboid-related protein 3 isoform X1
KO
K02857
rhomboid-related protein 1/2/3 [EC:
3.4.21.105
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cclu01002
]
121553962
Enzymes [BR:
cclu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
121553962
Peptidases and inhibitors [BR:
cclu01002
]
Serine peptidases
Family S54: Rhomboid family
121553962
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Gene cluster
GFIT
Motif
Pfam:
Rhomboid
EF-hand_7
EF-hand_6
EF-hand_1
DUF5580_M
EF-hand_11
EF-hand_9
EF-hand_5
AIF-1
EF-hand_8
EH
Motif
Other DBs
NCBI-GeneID:
121553962
NCBI-ProteinID:
XP_041723301
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Position
20:complement(2385831..2451927)
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AA seq
408 aa
AA seq
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MPDASRDMPVHSSPAVAANAEGDEIEVLESIDVLPVAPEDQWKSLFDKFDPESSGFISTE
RFRDLLAAHGSELDPHKLEVLLALADGNADGKICYQDFVNLMSSKRSNSFRRAILQGSRQ
LKGAGALGEEVGLGLSQRLVRHIAYETLPREIDRKWYFDSYTCCPPPWLILAITIAEVAV
FMYYGLQLDRWVLQVSSPHFLRGPLPYHPQLRIQAWRYVSYAFMHAGIEHLGLNMAMQLL
VGVPLEMVHGALRIGLVYVCGVLAGSLAVSVTDMTAPVVGSSGGVYALVSAHLANVVMNW
SGMKCQFKLFRMAMALVCMSVEFGRAVWLRFYPPAFPPCPNPSFVAHLGGVMVGLTLGVV
VLQNYEQRLQEQSLFWIFFSVYFLFVLCAVFWNVFAYSLLDVRLPPTP
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgcccgacgcgtctcgggacatgccggtgcattcctctccagcagtggcggcgaacgcg
gagggagacgagatagaagtgctggagagtatcgatgtccttcccgtggccccagaggac
caatggaaatctctgttcgacaagttcgacccagagagttcaggcttcatcagtacagag
cggttcagggacctgctggcggcccacggctcggagctggaccctcacaagctggaggtt
ctattggccctcgccgacggcaacgcagatggaaagatctgctaccaggactttgtcaac
ctgatgtccagcaagcgcagcaacagcttccggcgggctatcctccaggggagtcgtcag
ctgaagggggccggggccctgggggaggaggtgggtctgggtctgtcccagaggctggtg
aggcacatcgcctacgagaccctgccccgggagatcgacaggaagtggtacttcgacagc
tacacctgctgcccaccaccctggctcatcctggctatcaccatcgctgaggtggcagtg
ttcatgtactatggtctgcagttggaccgctgggtgctgcaggtgtccagtccccacttc
ctgaggggcccgctgccctaccacccccaactacggattcaggcctggagatacgtcagc
tacgccttcatgcatgcagggatagaacacctgggtctgaacatggccatgcagctgctg
gtgggagtccctctggagatggtccatggagcgctgaggataggactggtctacgtgtgt
ggcgtactggcaggctccctggccgtgtctgtcactgatatgactgctccggtggtgggg
tcgtctggaggagtctacgccctggtctcagcacacctggccaacgtcgtcatgaactgg
tcaggaatgaaatgtcagtttaagctgttccggatggccatggctctggtctgcatgagt
gtggagttcggccgtgccgtgtggctgcggttctacccgccggccttcccgccctgcccc
aaccccagcttcgtggcccacctggggggtgtcatggtggggctcaccctgggagttgta
gtcctccagaactacgagcagcggctccaggagcagtctctattctggatcttcttctcc
gtctacttcctctttgtcctctgtgctgtcttctggaacgtctttgcctacagcctgctg
gacgtccggctcccccccacgccatga
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