Coregonus clupeaformis (lake whitefish): 121553973
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Entry
121553973 CDS
T08357
Name
(RefSeq) vacuolar protein sorting-associated protein 72 homolog
KO
K11664
vacuolar protein sorting-associated protein 72
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
121553973
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cclu03036
]
121553973
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Chromatin remodeling factors
SRCAP complex
121553973
SWR1 complex
121553973
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YL1
YL1_C
Motif
Other DBs
NCBI-GeneID:
121553973
NCBI-ProteinID:
XP_041723319
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Position
38:3587471..3604463
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AA seq
365 aa
AA seq
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MSLAFSKEPRKTAGNRMSKLLDAEEDEFYKTTYGGFNDESGDDEYRGEHSDTEDEVDSDF
DIDEGDEPDSDLEDDAPRRKSRVVTKAYKEPLKVTKPKPKRPSEELKKTEKAKVERRAPQ
EFPEFEETRKSVRQSTSEHTRKTNLRLQERQDAPRRRRGAHHDRPLAQEELLAEAKITAE
INLRSLENYERLEADKKKRVHKKRRFEGPTIRYHSVLMPLVPNSIFKEENVDVEGFDQDT
PQSVAPVAPSPMPSKQPMGGLCSRTYITFSDEEAFEAAFPQAVRTGSQPPTQEVCPVTHK
AALYKDPVTDIPYANTQAFCIIREAYRKYVAAHGFPNSAGGFSVVDASGARGARQKMVKQ
STVAT
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgagtttagcatttagcaaagagccccgtaagacggcggggaaccgcatgtcgaagtta
ttggatgctgaagaagatgaattctacaagaccacctacggcggattcaacgatgaatca
ggagatgatgagtacagaggggagcactcggacacagaggacgaggtcgacagtgacttt
gacatagatgagggtgacgagcctgatagtgacctggaggacgatgctcctcgcaggaag
agtcgagttgtcaccaaagcgtataaggaacctctgaaggtgaccaagcctaaaccaaag
aggccctcggaggagctgaagaagactgagaaagccaaagtggagaggagggccccgcaa
gagtttccggagtttgaagagactcggaagtctgtgcgccagtcgaccagcgagcatacg
cggaagaccaacctgcgactgcaagaaaggcaggatgccccacgacggcggaggggagcc
caccacgaccgacccctggcacaggaagagttgctggctgaggccaaaataactgctgag
atcaacctccgatcactggagaactacgagcgtcttgaggccgacaagaaaaaacgggtc
cataagaagcggcgatttgagggccccaccatccgctaccactctgtcctcatgcccctg
gtgcccaactccatctttaaagaggaaaatgtggatgtggaagggttcgaccaggacaca
ccgcagtccgttgctcctgtggcaccaagtcccatgccttccaagcagcccatgggaggt
ctttgctcccgcacttacatcacctttagcgacgaggaggcttttgaggctgccttcccc
caggcagtgcggactggctcccagccccccacccaggaagtctgtcctgtcacccacaag
gctgcactgtacaaagacccagttacagacatcccctatgccaacacacaagccttttgc
attattcgtgaagcttaccgcaaatatgtggcagctcatggattccccaactctgcaggg
ggtttctctgtggttgatgcctcaggtgccaggggtgcccgccagaaaatggtcaagcag
agcacagttgcaacatag
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