Coregonus clupeaformis (lake whitefish): 121553981
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Entry
121553981 CDS
T08357
Name
(RefSeq) homeobox protein MSH-C
KO
K09341
homeobox protein MSX
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121553981
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
121553981
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
HTH_NDX
DUF7645
Motif
Other DBs
NCBI-GeneID:
121553981
NCBI-ProteinID:
XP_041723333
LinkDB
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Position
10:62668371..62671704
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AA seq
283 aa
AA seq
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MAPYPFEMNPVGLPGSPSHEIKLHQKEESDMEGEELQPKDMTTDKGYKMKTSSLPFSVES
LISKKTTCRNYYSSPSSESGLLQRKPVTAAVQSTEQFSPRTFYAERKVSPESSQSVSDCQ
NEDNPDFCEKDQSTWFQTSSFSTPPRSLSPPPCPLRKHKNNRKPRTPFTTSQLLALERKF
RQKQYLSIAERAEFSNSLNLTETQVKIWFQNRRAKAKRLQEAELEKYKLASKPMLPAFAL
PFPLGAHMGSPSLYGHSNAYPRHTLPVPGLFGGPVTYGMYYLS
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atggccccgtatccctttgagatgaatcccgttggcctaccggggtctccgtcccacgag
attaaactccaccagaaagaagagtcggatatggagggtgaggagcttcaacccaaagac
atgacaaccgacaaaggatacaaaatgaagacgagcagtcttccattcagcgtcgaatca
ttgatttccaagaagacaacctgcaggaattactattcttctccctcctcggaatcgggt
ctacttcaacggaagcctgtgacggcggcggtgcagagcaccgaacagttttctccaagg
actttttacgcagagaggaaagtttccccggaaagttcgcagagcgtgtcggactgtcag
aatgaggacaatccagatttttgtgagaaagaccagagcacttggttccagacttcatct
ttctcgactccccctcgaagcttaagtccacctccatgtcctttaaggaaacataaaaac
aaccgaaaacctcgaacgcccttcactacctcccagctgctcgctctggaaaggaagttc
cgacaaaagcagtacctctccattgcggagcgagccgaattctccaactccctcaatttg
accgagacccaggtcaaaatctggttccaaaacaggagggctaaagccaagagacttcag
gaggccgagttggaaaaatacaaactggcgtcgaaacccatgctacctgcctttgctctg
ccattccccctgggagcgcacatgggctctccatctctctacggacattctaacgcctac
cccaggcacactttacctgttccgggactcttcggtggacctgtcacctatggaatgtat
tatttgtcttga
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