Coregonus clupeaformis (lake whitefish): 121554000
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Entry
121554000 CDS
T08357
Symbol
trmt1
Name
(RefSeq) tRNA (guanine(26)-N(2))-dimethyltransferase
KO
K00555
tRNA (guanine26-N2/guanine27-N2)-dimethyltransferase [EC:
2.1.1.215
2.1.1.216
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cclu03016
]
121554000 (trmt1)
Enzymes [BR:
cclu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.215 tRNA (guanine26-N2/guanine27-N2)-dimethyltransferase
121554000 (trmt1)
2.1.1.216 tRNA (guanine26-N2)-dimethyltransferase
121554000 (trmt1)
Transfer RNA biogenesis [BR:
cclu03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
121554000 (trmt1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRM
Torus
zf-CCCH
zf-CCCH_9
zf-CCCH_4
Cons_hypoth95
TRM5-TYW2_MTfase
Motif
Other DBs
NCBI-GeneID:
121554000
NCBI-ProteinID:
XP_041723358
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Position
38:complement(191807..203084)
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AA seq
664 aa
AA seq
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MLISTARLLLLLPVPFTHQRIIRTVGSVAYRGLRTMEPLRAPQDPKVNTTLSGVDTKPQP
PTSGAPMEGLNPTPAASIPDQETAPTTGLLPGETVVREGKAAILFPSANEVFYNPVQEFN
RDLTCAVVTEFAREQMAQRGVKVVVPGEKERVVVNLADEKKEETEMQTGEKGGEEPVVTA
SVGERCENGLRVLEGLAASGLRSVRFALEVPGLRSVTANDFSAKAAALIARNAQHNGVTH
LLQASQRDASMLMYEMRGKKERYDVIDLDPYGSPAPFLDAAVQAVGEGGLLCVTCTDMAV
MAGNSGETCYSKYGSVSIKAKYCHEMALRIILHSLDQRAGVYQRYIHPLLCVSVDFYIRV
FVRVHTGQAMVKNSASKQALVYNCVGCGSFHLQRLGKRTTQGKHIKYSAATGPPVGAECE
HCGHRHQLGGPIWGEALHDVSFVQKVLSAVSGNPSRFGTARRIEGMLSMVTEELEDVPLY
YTVDNLSSTVHCSTPPLLQFRSALLHAGHRVSLSHACKNALKTDAPPRVLWDVMRCWEKS
NPVKRDRLSESSPAHQILNTEPILQACFDVREDANPQSRRRHLTRFQENPEPFWGPKARA
KAGGGGISSDLEDRRKQGQNKRKNQITDATQLKSFPCKRFRKGKCTHGEKCCYSHDLEQT
DKME
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgctgatcagcactgctcggctactcctcctcttacctgtacccttcacccaccagagg
attataaggacagttggcagtgttgcttacaggggactgagaaccatggagcccctcagg
gcccctcaggatcccaaagttaacaccaccctgtctggggtagacacaaagcctcagccc
cctacctctggagctcctatggagggcttgaacccaactccagctgcctcaatacctgac
caggagacggccccgacaacggggctgttgccaggggagacagtcgtcagggagggcaag
gcggccatcttgtttcccagtgccaacgaggtgttctacaaccccgtgcaggagttcaac
agagatctgacgtgtgcggtggttacagagtttgcccgggagcagatggcccagaggggg
gtgaaagtggtagtgccaggggagaaggagagggtggtggtcaacctagctgacgagaag
aaagaggagacagaaatgcagacaggggagaaaggaggagaggagccggtcgtaactgct
tcagtgggggagcgctgtgagaatggtttacgtgtgttggagggtctggcagcgtctggc
ctacgctctgtgaggtttgctctggaggtgcctggtctacgtagcgtcacggctaacgac
ttctcagccaaggctgctgccctcatcgcccgcaatgcccagcacaatggggtcacacac
ctactgcaggccagccagagagacgccagcatgctgatgtatgagatgcgggggaagaag
gaacgctatgatgtcatagacctggacccctacggaagccccgcccctttcctggatgca
gccgtgcaggccgtcggtgaaggaggtctgttgtgtgtgacgtgtactgacatggctgtg
atggctggtaacagtggggagacctgctacagcaaatacggctctgtctccatcaaagcc
aagtactgccatgagatggctctgcggatcatcctgcatagtctggaccagagagctggt
gtgtaccagcgttacatccaccccctgctctgtgtcagtgtggacttctacatacgagtg
tttgtcagggtacacactggacaggccatggtcaaaaactcagcaagtaaacaagcgttg
gtgtataactgtgtaggctgtggatccttccacttacaacgactgggcaagaggacgact
cagggaaaacatataaagtactctgcagccactggaccgccggtcggagcagaatgtgaa
cactgtggacacagacaccagctgggtggtcctatctggggtgaggccctccatgatgtg
agctttgttcagaaggttctatctgctgtgtctgggaacccgtcccgctttggaaccgcc
cgacgcatagagggcatgctcagcatggtcacagaggagctggaggatgtgcctctatac
tatacagtggacaacctgagcagcactgtacactgcagcactccccctctactccaattc
cggtctgctctgcttcatgcaggccacagggtgtctttgtctcatgcctgtaagaatgct
ctaaagacggacgctcctcccagggtcctctgggacgtcatgcgatgctgggagaagtcc
aatccagtgaagagagacagactgtcagagagcagccctgctcaccaaatcctcaatact
gaacccattctacaggcgtgttttgatgtgagggaggatgccaatccccagtcccgtcgt
cgccacctcacccgcttccaggagaaccctgagccattctgggggcccaaggcccgcgcc
aaggctggtggtggaggtatctcatcagacctggaggacaggaggaaacagggtcagaac
aagagaaagaaccagattacagacgccacccagctcaagagcttcccctgcaagaggttc
agaaagggtaaatgcacacatggtgaaaaatgctgttactcccatgacctggaacagact
gacaagatggagtga
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