Coregonus clupeaformis (lake whitefish): 121554012
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Entry
121554012 CDS
T08357
Name
(RefSeq) nuclear factor of activated T-cells, cytoplasmic 1-like
KO
K04446
nuclear factor of activated T-cells, cytoplasmic 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04010
MAPK signaling pathway
cclu04020
Calcium signaling pathway
cclu04148
Efferocytosis
cclu04218
Cellular senescence
cclu04310
Wnt signaling pathway
cclu04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121554012
04310 Wnt signaling pathway
121554012
04020 Calcium signaling pathway
121554012
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
121554012
09143 Cell growth and death
04218 Cellular senescence
121554012
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
121554012
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121554012
Transcription factors [BR:
cclu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
121554012
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RHD_dimer
RHD_DNA_bind
TIG
Motif
Other DBs
NCBI-GeneID:
121554012
NCBI-ProteinID:
XP_041723381
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Position
38:2709529..2785208
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AA seq
858 aa
AA seq
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MKSAEEDAYTHTPNVSLSLGKPCLPSQDHSLQSGPIISVSISQPPSYSAHNDMRTVGYYS
SPSVRPNGAPILESPRIEITAYGQFPEDEVEESNNLPVAKQVNSIVTLTLPNADGYRDPS
CLSPASSVSSRSCHSEASSYESGFSYNYESSPHNSPWQSPCVSPKGSSSLALPGDACTHA
GSPRHSPSTSPRTSVTDDSWMGQRGSRPNSPCGGKRKYSFNGTATYKYPYSPNYSPGPSP
HTSPRLSVTDESWMPNNTNQYTNSAIVAAINALTTDGVADQGEGIPLKARKTSLEPGAVC
LKVEPGGEELSPGDLCQDEYPSSRLPFKKENYCGGFLDVPPHPYSWSKPKQYVSPSLPAL
DWQLPSSSGPYSLQIEVQPKSHHRAHYETEGSRGAVKALAGGHPVVQLHGYMETEPLTLQ
LFIGTADDRLLRHHAFYQVHRITGKTVSTPSHETLQSNTKVLEIPLLPENNMRAIIDCAG
ILKLRNSDIELRKGETDIGRKNTRVRMVFRVHINQPTGRTLSLQAASNPIECSQRSAQEL
PLVDKQTLETCPAAGGEKMLLSGHNFQHDSKVVFMEKAQDGHHLWETEAKVDKDSSKSTS
LLIEIPPYRNQRISNPVQVNFYVCNGKRKRSQYQCFTYVPANVPMIKMEPHDDYGPQRGS
GLALHPKPYYTPQVMTSMIPTELRLCVGGAYPACQQRLGGKPSSLSSSSSPSTSPKLHDL
SPTTPFSKCLSAGPSQSPIPHVSIIQETPGRYQPQPVLYPPSSASSSPGSQPSTPGTSGP
EAPFSPTHCLTPPQPISGSSSPVTQQLPKVPERGGRSSSPTLAINIKQEPQELDQMYLDD
VNEIIRNDLSSISVHSHA
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atgaaatctgctgaagaggatgcatacacccacacccccaacgtcagtctctctctgggc
aaaccctgcctgccctcccaggaccacagtctccagtctggccccatcatctcagtctcc
atcagccagcctcccagctacagtgctcacaatgacatgaggacagtgggttactactcg
tcccctagcgtccgtccaaacggggccccgatcctcgagagccctcgtattgaaatcaca
gcctacgggcagtttcctgaggatgaggtggaagagagcaacaaccttcctgtggctaaa
caggtaaactccatcgtgaccctgacgttgcccaacgcagatggctaccgtgaccccagc
tgtctcagcccggccagcagtgtgtcgtcacgcagctgtcactccgaggcctcgtcctac
gagtcgggcttctcctacaactacgaaagctcaccccataactcaccctggcagtcaccc
tgcgtctcacccaagggctcctcctctctcgccctgcctggggatgcttgcacccatgcg
ggctccccccgtcactccccctccacctccccccgcaccagtgtcacggacgacagctgg
atgggccagcggggctccaggcccaactccccttgtggtggtaagaggaaatacagcttc
aacggaaccgcaacctataagtacccctactcccccaactactcccccggtccgtcccct
cacacctccccacgcctcagcgtcacagacgagtcctggatgcctaacaacacaaaccag
tacaccaactcagccatagttgcagccatcaatgctctgaccacagacggtgtggcggac
cagggggagggcatccctctgaaggcccggaagaccagcctggagcctggggcagtctgc
ctgaaggtagagcctggaggagaggagctcagccctggggacctttgtcaggatgagtac
ccctcctcccgcctgccctttaagaaggagaactactgtgggggattcctggatgtgcca
ccgcacccatactcatggtccaagccaaagcaatatgtcagcccatctctgccagccctt
gactggcagctgccatccagctcggggccgtacagcttgcagatcgaggtgcagcccaaa
tctcaccaccgtgcccactacgagaccgaagggagcagaggggcagtcaaggctctggca
ggaggacaccctgtggtgcagctccacggctacatggagaccgagcccctgaccttgcaa
ctgttcattggcacggcagatgaccgtctcctgcggcaccatgccttctaccaggtccac
cgcatcaccggcaagaccgtctccacccccagccatgagaccctgcagtccaacaccaag
gtgctggagattccactgctgcccgagaacaacatgcgcgccataattgactgtgccggc
atcctgaaacttcgcaactcggacatcgagctgcggaagggcgagacggacatcgggcgt
aaaaacacacgtgtgaggatggtgttccgggttcacatcaaccagcccacaggaaggaca
ttatccctgcaggctgcatccaaccccatagagtgctcccagagatcagcccaagagttg
cccctggtggataagcagaccctggagacgtgccctgctgctgggggagagaagatgctc
ctcagcggacacaacttccagcacgactccaaggtggtgttcatggagaaagcccaagat
ggccatcacctatgggagacagaggccaaggttgacaaggactcctccaagtctacatct
cttctcattgaaatccctccttatcggaaccagaggatatccaatcctgttcaggtgaac
ttctatgtgtgcaatggcaagaggaaaaggagccaataccagtgcttcacctacgtgcct
gccaatgttccaatgataaaaatggagccgcatgatgactacggtccccagcgtggctct
ggcctggcgctacaccccaagccctactacaccccacaggtcatgacctccatgataccc
acagaactccggctgtgcgtggggggtgcctaccctgcttgccaacagagactgggaggg
aagccttcctcactgtcctcctcatcctcccccagcaccagtcccaaactgcatgacctg
tcacccaccacacccttctccaagtgcctgtcagcaggcccatcccagtctccgatccca
catgtctccatcatccaggagactcctggacgctaccagccgcaacctgtcctctacccg
cccagtagtgcctcgtcctccccaggctcgcagccctccacccctggcaccagcggcccg
gaggccccgttctcccccacccactgcctaacgccgccccagcccatcagtggcagctct
agcccagtgacccaacagttacccaaagtgccagagagaggcggccgctcgtcaagcccc
acactggctatcaacatcaaacaggaaccacaggaactggaccagatgtacctagatgat
gttaatgagatcatcaggaacgacctctcaagcatctccgtccacagtcatgcgtag
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