Coregonus clupeaformis (lake whitefish): 121554028
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Entry
121554028 CDS
T08357
Name
(RefSeq) claudin-9-like
KO
K06087
claudin
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03272
Virion - Hepatitis viruses
cclu04382
Cornified envelope formation
cclu04514
Cell adhesion molecules
cclu04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
121554028
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
121554028
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
121554028
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
121554028
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cclu03037
]
121554028
04147 Exosome [BR:
cclu04147
]
121554028
04515 Cell adhesion molecules [BR:
cclu04515
]
121554028
Cilium and associated proteins [BR:
cclu03037
]
Other cilia and associated proteins
Stereociliary proteins
121554028
Exosome [BR:
cclu04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
121554028
Exosomal proteins of colorectal cancer cells
121554028
Cell adhesion molecules [BR:
cclu04515
]
Immunoglobulin superfamily
L1 family
121554028
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
CNNM
Clc-like
Motif
Other DBs
NCBI-GeneID:
121554028
NCBI-ProteinID:
XP_045067646
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All DBs
Position
38:complement(1847545..1849357)
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AA seq
217 aa
AA seq
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MASTGLQLLGLLLAVIGWVCGALVCASPLWRVSAFAGGEIVIAQVLWEGLWMTCLSQSTG
QIQCKTYDSTLALPISAQVSRTLSVLSLLLCLLALLLGVAGAKCTKCLGEGAYSSKARLA
RVAGVLFFFSGLLYLVPICWTAYAVVRDFYDPKVAAPLKRELGPALYLGWGAGVLLLVGG
ALLNAGSSPPGVRATPTFGGGGRSNPLPVVVEEKEYV
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccacaggcctgcagctacttggtctcctattggctgtgattggctgggtgtgc
ggggctctcgtctgcgcctcccccttgtggcgagtctccgccttcgcgggcggggagatc
gtgatcgcccaggttctatgggaggggctatggatgacctgtttgtcccagagtacgggg
cagatccagtgtaagacttacgactccaccctggccctccccatctccgcccaggtgtcc
cgcaccctctccgtgctgtccctcctcctctgcctcctcgccctcctgctaggcgtggct
ggggctaagtgcaccaagtgtctaggagaaggagcgtactcctccaaggctaggctagcc
cgtgtggctggggtactgttcttcttctctgggctgctctacctggtacctatctgttgg
acggcctacgccgtggtcagggatttttacgatccaaaagtcgccgcgccgctgaagagg
gagttaggccccgccttgtatctaggctggggtgcaggagttctgctgctggtgggaggg
gctctgctgaatgcaggctcctcccctccaggggttagggcaacgccgacttttggggga
ggtgggaggagtaacccactgcctgtggtggtagaggagaaggagtacgtctga
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integrated database retrieval system