Coregonus clupeaformis (lake whitefish): 121554049
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Entry
121554049 CDS
T08357
Symbol
samd1b
Name
(RefSeq) atherin
KO
K26266
sterile alpha motif domain-containing protein 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cclu03036
]
121554049 (samd1b)
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Other PRC associated proteins
121554049 (samd1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAMD1_SHD
SAMD1_WH
SAM_1
SAM_2
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
121554049
NCBI-ProteinID:
XP_045074713
LinkDB
All DBs
Position
Unknown
AA seq
670 aa
AA seq
DB search
MSEPKYRDWILETIDSLRSRKARPDLERICRMVRRRHGSDPDRTREELEKLIQEQTVLKV
SYKGSISYRNAAKVQRKSRKKSDFTPSSGGGSGGGSEAEGEQAKHASLNNNGDSAHSFTD
LEEVESQDREDDSVSEPSECPDPRPETPGITSEKKQKLFPPNSGNGPGCCPGCGEMGCAA
GRGCSGKASASKDKRLGERGGGGQDGGSSSSPLAGNHDTKPGHDGSGAPSKAKGVWGGGG
VETGQEGSSSSVGVAAETENTICQGSASSSSSSNSHLLRPKQLQPASPPVKPKLRAGRGE
GNPGVGGSGQTSSDLGDRLIASVRRLAEQNRASALRGETRGGHKPLGLKEILGYLTSQDG
LSSEGKLTRNRVKVVLEREVARGRLRRTRCGNITLPVRGVEAAPVPAKPHGPANRLLKSA
LQDKHIGKKEVKEEEPMETESGEEEEEEDEEEKGTGDAEDGGQSDTQTSGGEEGSKGVTC
PAPVPMETEPGNGDDITGGSEGQAGVKQEDNQPEHTTNTVSADQIHTDTQDQNVVQSERM
SHTSSVHNHNCSACKTEVGVSSCLLTPTASPRDSGLAEERGMNGGVFVKSELGRLNPVNW
TVSDVVSYFTSAGFPEQALAFRTQEIDGKSLLLMQRNDVLTGLSIRLGPALKIYERHVKV
LQRTHFEEDD
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaacccaagtaccgggactggatcctcgagacaatcgactctctgcgctcccgg
aaagcccgaccggaccttgagagaatatgtcgtatggtccggagaagacacggctcggat
ccagacagaacccgggaggaactggagaaactgatccaagagcaaacagtgctcaaagtt
agctataagggctccatatcctacaggaatgcggcgaaggtgcagagaaagagtcgaaag
aagagtgacttcacgccgagtagcggcggcggtagcggtggtgggagcgaggcggaggga
gagcaagccaaacacgccagtttgaacaacaacggggacagcgcgcacagctttaccgac
ctagaggaggtggagagccaggaccgagaggatgactctgtctccgagccgagcgagtgc
cctgacccccggccagaaactccgggtatcacctccgagaaaaaacaaaagctttttcca
ccgaatagcggaaacggccctggctgctgcccaggttgtggcgaaatgggctgtgctgcc
gggagaggctgcagtgggaaagcaagtgcgtcaaaagacaagagattaggagaaagagga
ggaggggggcaggatgggggtagcagcagcagccctttggccggcaaccacgacacaaaa
ccgggccacgatgggagcggtgctccgagcaaagcaaagggggtctggggtggaggggga
gtggagactgggcaggagggcagcagtagcagcgttggtgttgctgctgaaacggaaaat
acaatttgccaggggagcgccagttctagttccagcagcaacagccatctcctgcggccg
aaacagcttcagccagcatccccacctgtcaaacccaaactccgggccggccgaggtgag
gggaacccgggggtggggggcagcgggcaaaccagctcggatctgggcgacagactgatc
gcctccgtccgcagactagccgagcagaaccgagcctccgcgttaagaggggagacccgc
gggggccacaagccgctgggactgaaggagatcctgggttacctgaccagccaagacggc
ctctcatctgagggtaagctgacccgcaacagagtcaaggtggttctggagagagaggtg
gcgagaggtcggctgcggaggacccggtgtgggaacatcactcttccggtgaggggagtg
gaggcagcgccagtcccagcaaagccccacggccccgctaacagactgctaaagagcgca
ctgcaggataagcacattgggaaaaaggaggtgaaagaggaggagccaatggagacagag
agtggagaggaggaggaggaggaggatgaagaggagaagggaacaggggatgctgaggat
gggggacagagtgacacccaaacctcagggggtgaggagggttctaagggggtgacttgc
cctgccccggttcccatggaaacggaaccggggaatggtgatgacatcactggaggttcc
gagggacaggcgggggtgaagcaggaggacaatcaacctgaacacacaaccaatactgtc
tctgcagaccagatacacacagacacacaggatcagaatgtggtacagtcagagagaatg
agccacacttcctctgtccacaaccataactgttcagcctgtaagacagaggtgggcgtg
tcctcctgtctcctcaccccaaccgcctcacctagagactctggtctggcagaggagaga
gggatgaatggaggagtgtttgtgaagtctgagctgggcaggctaaacccagtgaactgg
acagtgtctgacgtggtcagttatttcacgtcagcagggtttccagaacaggccttagcc
ttcaggactcaggagatagatgggaagtccctcctcctgatgcagcgtaatgatgtgctt
acaggcctgtcaatcaggctaggccccgccctgaagatctatgagcgccacgtgaaggtt
ctgcagagaacacactttgaagaggacgactga
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