KEGG   Coregonus clupeaformis (lake whitefish): 121554049
Entry
121554049         CDS       T08357                                 
Symbol
samd1b
Name
(RefSeq) atherin
  KO
K26266  sterile alpha motif domain-containing protein 1
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cclu03036]
    121554049 (samd1b)
Chromosome and associated proteins [BR:cclu03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Other PRC associated proteins
     121554049 (samd1b)
SSDB
Motif
Pfam: SAMD1_SHD SAMD1_WH SAM_1 SAM_2 SAM_PNT
Other DBs
NCBI-GeneID: 121554049
NCBI-ProteinID: XP_045074713
LinkDB
Position
Unknown
AA seq 670 aa
MSEPKYRDWILETIDSLRSRKARPDLERICRMVRRRHGSDPDRTREELEKLIQEQTVLKV
SYKGSISYRNAAKVQRKSRKKSDFTPSSGGGSGGGSEAEGEQAKHASLNNNGDSAHSFTD
LEEVESQDREDDSVSEPSECPDPRPETPGITSEKKQKLFPPNSGNGPGCCPGCGEMGCAA
GRGCSGKASASKDKRLGERGGGGQDGGSSSSPLAGNHDTKPGHDGSGAPSKAKGVWGGGG
VETGQEGSSSSVGVAAETENTICQGSASSSSSSNSHLLRPKQLQPASPPVKPKLRAGRGE
GNPGVGGSGQTSSDLGDRLIASVRRLAEQNRASALRGETRGGHKPLGLKEILGYLTSQDG
LSSEGKLTRNRVKVVLEREVARGRLRRTRCGNITLPVRGVEAAPVPAKPHGPANRLLKSA
LQDKHIGKKEVKEEEPMETESGEEEEEEDEEEKGTGDAEDGGQSDTQTSGGEEGSKGVTC
PAPVPMETEPGNGDDITGGSEGQAGVKQEDNQPEHTTNTVSADQIHTDTQDQNVVQSERM
SHTSSVHNHNCSACKTEVGVSSCLLTPTASPRDSGLAEERGMNGGVFVKSELGRLNPVNW
TVSDVVSYFTSAGFPEQALAFRTQEIDGKSLLLMQRNDVLTGLSIRLGPALKIYERHVKV
LQRTHFEEDD
NT seq 2013 nt   +upstreamnt  +downstreamnt
atgtccgaacccaagtaccgggactggatcctcgagacaatcgactctctgcgctcccgg
aaagcccgaccggaccttgagagaatatgtcgtatggtccggagaagacacggctcggat
ccagacagaacccgggaggaactggagaaactgatccaagagcaaacagtgctcaaagtt
agctataagggctccatatcctacaggaatgcggcgaaggtgcagagaaagagtcgaaag
aagagtgacttcacgccgagtagcggcggcggtagcggtggtgggagcgaggcggaggga
gagcaagccaaacacgccagtttgaacaacaacggggacagcgcgcacagctttaccgac
ctagaggaggtggagagccaggaccgagaggatgactctgtctccgagccgagcgagtgc
cctgacccccggccagaaactccgggtatcacctccgagaaaaaacaaaagctttttcca
ccgaatagcggaaacggccctggctgctgcccaggttgtggcgaaatgggctgtgctgcc
gggagaggctgcagtgggaaagcaagtgcgtcaaaagacaagagattaggagaaagagga
ggaggggggcaggatgggggtagcagcagcagccctttggccggcaaccacgacacaaaa
ccgggccacgatgggagcggtgctccgagcaaagcaaagggggtctggggtggaggggga
gtggagactgggcaggagggcagcagtagcagcgttggtgttgctgctgaaacggaaaat
acaatttgccaggggagcgccagttctagttccagcagcaacagccatctcctgcggccg
aaacagcttcagccagcatccccacctgtcaaacccaaactccgggccggccgaggtgag
gggaacccgggggtggggggcagcgggcaaaccagctcggatctgggcgacagactgatc
gcctccgtccgcagactagccgagcagaaccgagcctccgcgttaagaggggagacccgc
gggggccacaagccgctgggactgaaggagatcctgggttacctgaccagccaagacggc
ctctcatctgagggtaagctgacccgcaacagagtcaaggtggttctggagagagaggtg
gcgagaggtcggctgcggaggacccggtgtgggaacatcactcttccggtgaggggagtg
gaggcagcgccagtcccagcaaagccccacggccccgctaacagactgctaaagagcgca
ctgcaggataagcacattgggaaaaaggaggtgaaagaggaggagccaatggagacagag
agtggagaggaggaggaggaggaggatgaagaggagaagggaacaggggatgctgaggat
gggggacagagtgacacccaaacctcagggggtgaggagggttctaagggggtgacttgc
cctgccccggttcccatggaaacggaaccggggaatggtgatgacatcactggaggttcc
gagggacaggcgggggtgaagcaggaggacaatcaacctgaacacacaaccaatactgtc
tctgcagaccagatacacacagacacacaggatcagaatgtggtacagtcagagagaatg
agccacacttcctctgtccacaaccataactgttcagcctgtaagacagaggtgggcgtg
tcctcctgtctcctcaccccaaccgcctcacctagagactctggtctggcagaggagaga
gggatgaatggaggagtgtttgtgaagtctgagctgggcaggctaaacccagtgaactgg
acagtgtctgacgtggtcagttatttcacgtcagcagggtttccagaacaggccttagcc
ttcaggactcaggagatagatgggaagtccctcctcctgatgcagcgtaatgatgtgctt
acaggcctgtcaatcaggctaggccccgccctgaagatctatgagcgccacgtgaaggtt
ctgcagagaacacactttgaagaggacgactga

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