Coregonus clupeaformis (lake whitefish): 121554061
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Entry
121554061 CDS
T08357
Name
(RefSeq) neuronal-specific septin-3 isoform X1
KO
K16938
septin 3/9/12
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
121554061
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cclu03037
]
121554061
04812 Cytoskeleton proteins [BR:
cclu04812
]
121554061
04147 Exosome [BR:
cclu04147
]
121554061
Cilium and associated proteins [BR:
cclu03037
]
Motile cilia and associated proteins
Sperm associated proteins
121554061
Cytoskeleton proteins [BR:
cclu04812
]
Eukaryotic cytoskeleton proteins
Septins
Septins
Group 1
121554061
Exosome [BR:
cclu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121554061
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Septin
MMR_HSR1
RsgA_GTPase
GTP_EFTU
AIG1
Roc
AAA_16
Ras
AAA_22
ABC_tran
NB-ARC
Dynamin_N
AAA_29
SRPRB
P-loop_TraG
URGCP_GTPase
FtsK_SpoIIIE
Ploopntkinase3
Sigma54_activat
AAA_7
G-alpha
FeoB_N
Motif
Other DBs
NCBI-GeneID:
121554061
NCBI-ProteinID:
XP_041723438
LinkDB
All DBs
Position
38:4342404..4415799
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AA seq
592 aa
AA seq
DB search
MSDSKVTAHLDGIISDFEALKRSFEVEDVDTSANSSPGSRRAPNNTNHRPVMSPTSIYYR
ELGANNNNGSTPKTIMGGGGSKPPEPISRGRTELSIDISSKQVDPTSPGSLRFGAKRPEV
LGHSKTPEMGHKREVTFAKTPQDAVIRGGARTPEPPSHGRRFEPPSPGDGPATRTTPGIS
ITKAPETMGNGKNNHENHGHHAPVHHPHHPNPHHNTIVTTIRCSSPNRTKSPNPDRSEVN
PSHSNMSAPPHPHPPAKGASNGAGDFSYVGIDAILEQMRRKAMKQGFELNIMIVGQSGLG
KSTLMNTLFKSKVSRKSVVSTPEERIPKTIEIKSISHDIEEKGVRMKLTVIDTPGFGDHI
NNENCWQPIMKFINDQYEQYLQEEININRKKRIPDSRVHCCMYFIPPTGHCLRPLDVEFM
SRLSKVVNIVPVIAKADTLTLEERDFFKQTIREELRANGIDVYPQKEFDEDADDRMTNDK
IREMIPFAVVGSDQEYQVNGKKLLGRKTKWGTIEVENIAHCEFAYLRDLLIRTHMQNIKD
ITSSIHYEVYRVRRLNETNAQPNGQPPNTLVNPQPQQANGVAAQHQVLTHEM
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgtctgactccaaggttactgctcacttggacggaattatctctgactttgaagctcta
aagaggtcgtttgaggtggaggatgtggacacctcggccaactcctcgccaggctcccgc
cgggcgcccaacaacaccaaccaccgccccgtcatgtcccccaccagcatctactaccgt
gagctgggcgccaacaacaacaacggctccacccccaagaccatcatgggagggggcggc
tccaagcctcctgaacccatatcccggggacgtacggagctctccatcgacatttcctcc
aagcaggtggatccaaccagccctggttccctccgattcggcgcgaaacgacccgaggtc
ttaggccactccaagacgcccgagatgggccacaaacgggaggtgaccttcgctaaaacg
ccccaggatgcggtgattcgcggaggggcccggacccccgagccccctagccacggccgg
aggtttgagccccccagtccgggggacggcccggccacaaggaccacaccagggatcagc
atcaccaaagcacccgagacaatggggaatggaaagaacaaccacgagaaccatggtcat
catgcaccggtccaccacccacaccaccccaacccccaccacaacaccatcgtcaccacc
atccgctgctcttcgcccaaccgcaccaagtcccccaaccctgacaggtcagaggtcaat
ccgagccacagcaacatgtccgccccaccacatccgcacccccctgctaagggggcatca
aatggcgctggcgacttcagctacgtgggcatcgacgccatcctggagcagatgaggagg
aaggccatgaaacagggctttgagctcaacatcatgattgtcggtcagagtggtctgggg
aagtcgaccctgatgaacaccctgttcaagtctaaggtcagcaggaagtctgtggtatcc
acccccgaggagaggatccccaagaccatcgagatcaagtccatcagtcacgacatcgaa
gagaagggcgtgaggatgaaactaacggtaatcgacactcccggctttggggaccacatc
aacaacgagaactgctggcagccaatcatgaagttcatcaacgaccagtatgagcagtac
ctgcaggaggagatcaacatcaacaggaagaagaggatcccagactcacgggttcactgc
tgcatgtacttcataccacctactggacactgtctgaggcccctggatgtggagtttatg
agtcgtctgagtaaagtggtcaacatagtccctgtcatcgctaaggcagacacactcacc
ctggaggagagggacttcttcaaacagacgatcagggaagagctgcgagccaacgggatc
gacgtctaccctcagaaggagtttgacgaggacgctgacgacaggatgaccaatgataag
atcagggagatgatcccatttgctgtggtggggagcgaccaggagtaccaggtcaatgga
aagaagcttctgggcagaaaaacaaagtggggcaccatagaagttgagaacattgcacac
tgcgagtttgcctatctgcgagaccttctcatcaggacccacatgcagaacatcaaggac
atcaccagtagcatccactacgaggtgtaccgtgtccgtcggctaaatgagaccaacgcc
cagcccaatggccagccacccaacacattggtcaacccacagccacagcaggccaatggg
gtggcagcacagcaccaagtcctgacccatgagatgtag
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