KEGG   Coregonus clupeaformis (lake whitefish): 121554070
Entry
121554070         CDS       T08357                                 
Symbol
pin1
Name
(RefSeq) peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 isoform X1
  KO
K09578  peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [EC:5.2.1.8]
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu03250  Viral life cycle - HIV-1
cclu04622  RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    121554070 (pin1)
 09150 Organismal Systems
  09151 Immune system
   04622 RIG-I-like receptor signaling pathway
    121554070 (pin1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cclu03021]
    121554070 (pin1)
   03110 Chaperones and folding catalysts [BR:cclu03110]
    121554070 (pin1)
Enzymes [BR:cclu01000]
 5. Isomerases
  5.2  cis-trans-Isomerases
   5.2.1  cis-trans Isomerases (only sub-subclass identified to date)
    5.2.1.8  peptidylprolyl isomerase
     121554070 (pin1)
Transcription machinery [BR:cclu03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     121554070 (pin1)
Chaperones and folding catalysts [BR:cclu03110]
 Protein folding catalysts
  Peptidyl prolyl isomerase
   Parvulin
    121554070 (pin1)
SSDB
Motif
Pfam: Rotamase Rotamase_3 WW Rotamase_2 WW_TCERG1 X8
Other DBs
NCBI-GeneID: 121554070
NCBI-ProteinID: XP_041723453
LinkDB
Position
38:1995185..2004047
AA seq 160 aa
MADAEDEKLPSGWEKRMSRSSSRVYYFNHITNASQWERPVGSGDGSGEPDKVRCSHLLVK
HSQSRRPSSWREENITRSKDEALDLIQKYIEQMKSGEEEFEALASQFSDCSSARNGGDLG
LFGRGQMQKPFEDASFALKVGDMSGPVFTDSGVHIILRTG
NT seq 483 nt   +upstreamnt  +downstreamnt
atggcagacgccgaggacgagaagctgccgtccggatgggagaagcggatgagccgcagt
tcaagtagagtatactactttaaccacatcaccaatgccagccaatgggagcgtccggtg
gggtcaggtgatgggagtggcgagccagacaaggtgcgttgttcccacctcctggtgaag
catagtcaatcacgtcgcccgtcctcctggagggaggagaacatcacacgctccaaagac
gaggccctcgaccttatacaaaagtacatagagcagatgaagtcaggagaggaggagttt
gaggctctggcctcccagttcagtgactgcagctccgcacgcaacggaggagacctggga
ctgttcggcagaggtcagatgcagaagccgtttgaggatgcgtcctttgctctgaaggtg
ggagacatgagtggtccggtgttcaccgactctggagttcacatcatcctccgcacggga
tag

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