Coregonus clupeaformis (lake whitefish): 121554131
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Entry
121554131 CDS
T08357
Symbol
elavl2
Name
(RefSeq) ELAV-like protein 2 isoform X2
KO
K13208
ELAV like protein 2/3/4
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cclu03019
]
121554131 (elavl2)
03041 Spliceosome [BR:
cclu03041
]
121554131 (elavl2)
Messenger RNA biogenesis [BR:
cclu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
121554131 (elavl2)
Spliceosome [BR:
cclu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
121554131 (elavl2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_occluded
BRX_assoc
RRM_2
Motif
Other DBs
NCBI-GeneID:
121554131
NCBI-ProteinID:
XP_041723511
LinkDB
All DBs
Position
Unknown
AA seq
388 aa
AA seq
DB search
MAVRLCDVASLLRSGSWAAEPWTGVIAAMETQLSNGPTCNNTSNGPSTISNNCSSPVESG
NIEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYVDPKD
AEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRII
TSRILVDQVTGVSRGVGFIRFDRRIEAEEAIKGLNGQKPPGATEPITVKFANNPSQKTSQ
ALLSQLYQSPNRRCPGPLAQQAQRFRLDNLLNMAYGVKSRFSPIAIDGVTSLAGINIPGN
AGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAA
MAIASLNGYRLGDRVLQVSFKTNKTHKA
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atggcagtcagactgtgtgatgtggcttctctgcttagaagtggttcgtgggcggcagag
ccttggactggggttattgctgccatggaaacacagctgtccaatgggcccacttgcaac
aacacaagcaatggtccctcaacaatctcaaacaactgctcctctccggtagagtcaggg
aacatagaggacagtaaaactaacttgatagtcaactacttgcctcagaacatgacccaa
gaagagctcaagagtttgtttgggagcatcggggaaatcgagtcctgtaaattagttcga
gacaaaataacagggcagagcctaggttatggatttgtgaattacgtggacccgaaagat
gcagaaaaagccatcaacaccttaaatggcctgagacttcagaccaaaaccattaaggtt
tcctatgctcgtccaagctcagcctccattagagatgcaaatttgtacgtcagtggcttg
ccaaaaaccatgactcagaaagaactggagcagctcttctcgcagtatggacgcatcatt
acctcacgcattctggtggaccaggtgaccggtgtctccagaggagtgggttttatcagg
tttgaccggcgaatcgaagcagaagaagccatcaagggcctgaacggccaaaaaccgcca
ggcgctacagagcccatcacagtgaagtttgccaacaaccccagccagaagaccagccag
gcactgctctcccagctgtaccagtcgcccaatcgaaggtgccccggaccccttgcacag
caggcacagcgcttcaggttggacaatctgctaaacatggcatacggagtcaagagcagg
ttctcccccattgccatcgatggagtgaccagcctggctggcatcaacatcccggggaat
gcgggcaccggctggtgcattttcgtctacaatctggctccggatgcagacgagagcatc
ctgtggcagatgtttggaccatttggtgccgtcacaaacgttaaagtcatccgcgacttc
aacacaaataagtgcaaagggttcggatttgtcaccatgactaactatgacgaggcagcc
atggccatcgccagcttgaacggataccgcctcggggacagagttctgcaagtctcgttc
aaaaccaacaaaacgcacaaagcctaa
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