KEGG   Coregonus clupeaformis (lake whitefish): 121554155
Entry
121554155         CDS       T08357                                 
Symbol
per1b
Name
(RefSeq) period circadian protein homolog 1b isoform X1
  KO
K21944  period circadian protein 1
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cclu03400]
    121554155 (per1b)
DNA repair and recombination proteins [BR:cclu03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    121554155 (per1b)
SSDB
Motif
Pfam: Period_C Per3-like_PAS-A bHLH_PER PAS_3 PAS_11 PAS
Other DBs
NCBI-GeneID: 121554155
NCBI-ProteinID: XP_041723553
LinkDB
Position
Unknown
AA seq 1440 aa
MSYDKSNSAPGNDTQERVGSANEEEEEKGVGTGVSFPGSNNSGSQLETSDLANRERGSSP
CGSGAGGSSGGDQRGPTSDDGDALSSVNDSGERESSEGGRQSGSGFRGRQSRSSHCSSSQ
KDSGMMLENTESNKSSNSQSQSPSPPSSSLAYSLLSASSEQDPPSTSGCSSNEQHQTARI
QTQKEMLKALKELKIRLPAERKGKGCSSTLDALKYALNCVKQVRANQEYYHQWGVEECHG
CSLDLSSYTIEELDNITSEYTLKNTDTFSMAVSFVTGKVVYISPQGSSMLRCKPERLLGA
IFSELLAPQDVSTFYSSTAPSRLPPWATCMGSVSPPTDCTQEKSIFCRISADRAQGDEMK
YQPFRMTPYQLTLRDFDTSAPQPCCLLLTERVHSGYEAPRIPADKRIFTTSHTPSCLFQE
VDERAVPLLGYLPQDLVGTPVLLYLHPEDRPIMVAIHKKILQFAGQPFNSSPLRMCSRSG
EYLTIDTSWSSFVNPWSRKVAFIVGRHKVRTSPLNEDVFTPLRSCEGRPMAPEIVQLSEQ
IHRLLVQPVHSGGSQGYSSLGSNGSRSHEQQHLSAASSVSDSKSTNAMEAMEAAVIALHK
PMTFQQICKDVHMVKTSGQQVFVDSCNRTPPWRHAVTTLRAIKGVDPIKSPVPKVVCPPK
TPVPNNQQLLKKEPPSDYSYQQINCLDSIIRYLDGCNVPNTVKRKFGSSSGTSTSDNDKL
QHETFGNAKGDLAIAVTLVGDSAGVAPLPPLALHSHKAESVASVTSQCSFSSTIVHVGDK
KPPESDIVMEDAPPIPTLATPTPIAVIDPPPPPPRMTSPPSRRGGLTKGLTKEVLSAHTQ
QEEQAFLCRFSDLSQLRVFDPASALRCPLPTNDPLATGARCSRDYPAAGGSRRRGRGAKR
LKQQESSEQRDPLAMGMTVTLRGPNVSPINSPPISTYPLPLGPTTTTSSSWPASVGSQAS
LASIPYPPGMLPIYPTLSQPMGIPSMQNQMVPPMMALVLPNYMFPQLNPNMTQMATAMGT
PMDTARNMMGSPMSQPGATMVTPSPQHFFNPNAGFPFPGTNGMPCPMPTMPSLMQTAMPI
QAQRPASGSSTPQSCSQVPAEREGPESPLFHSRCSSPLNLLQLVEELPSNRLEVATALAA
AAQQATPPAQASHERSADNSNENANDSNQDVESTSSDLLDLLLQEDSRSGTGSAASGSGF
SGSGSSGSGSSGSNGCSSSGSGTSRSQSSHTSKYFGSIDSSENDHSGKQPAGGSAAGEDG
EEQFIKCVLQDPIWLLMANTDDKVMMTYQLPTKDRETVLREDREALRAMHKHQPRFTEEQ
KRDLSQVHPWIRTGRLPRALNISACMECKSPPTIVPAAPFDVEIHEMELCSVLETTEKAS
TATQEKAPLPITAMDQGGQEHVAHAKTQGNDQEMTTEEQEVTSLTEEEKASAAAETDMTH
NT seq 4323 nt   +upstreamnt  +downstreamnt
atgagttatgacaaatcaaactccgcccctggcaatgacactcaagaacgagtgggaagt
gccaatgaagaagaagaagaaaagggggtgggaacaggagtgagcttcccgggcagcaac
aacagtggcagccaattggaaacatcggacttagccaatcgggagcgaggatcctctcca
tgtggatccggcgccggcggctcgtccgggggggaccaaaggggtcccacctcagacgac
ggggacgctctatccagtgtgaacgactccggggagagggagtcgagcgaaggagggagg
cagagtggcagtgggttcaggggacgtcaatccaggagttcccactgttcctccagccag
aaggactcaggcatgatgctggagaacacggagagcaataagagctctaactcccagtcc
cagagcccttctccacccagcagttccctggcctacagcctgctgtcagccagctcagag
caggaccctccctccacctctggctgcagcagcaatgagcagcaccagacggcccgcatc
cagacccaaaaggagatgctgaaagccctcaaggagcttaagatccgcctgcctgcagag
cgcaagggcaaaggttgctccagcaccctagacgccctcaagtacgccctgaactgtgtg
aagcaggttcgggccaaccaggagtactaccaccagtggggcgtggaggagtgccacggc
tgcagcctggatctgtcctcatacacaattgaggaactggacaacatcacctctgaatac
accctcaaaaacacagacaccttctccatggcggtgtccttcgtgacgggcaaggtggtg
tacatctccccccagggctcgtccatgctgcgctgcaagcccgagcggctcctgggggcc
atcttctctgagctgctggctccccaggatgtcagcaccttctacagcagtacggcgccc
tcacgcctgcccccctgggccacctgcatgggctctgtctccccaccgacagactgcacc
caggagaagtccattttctgtcgcatcagcgccgaccgggcgcagggagacgagatgaaa
taccagcccttccgcatgaccccctaccagctaaccctgagggattttgacacctcagct
ccccagccctgctgcctgctcctcaccgagcgggtacactctggatacgaagctccccgt
atccctgccgacaagaggatcttcaccaccagtcacacccccagctgtctattccaggaa
gtggatgaaagggccgtgccattgttgggctacctgccccaggacctggtgggaaccccc
gtgcttctctacctccaccctgaggacagacctatcatggtggccatacacaagaagatc
ctccaatttgcagggcagcccttcaacagctctcccctgaggatgtgttcccgcagcggg
gagtacttgaccatcgacaccagttggtcctccttcgtcaacccctggagcaggaaggtg
gccttcatcgtagggcgccacaaagtccgaaccagccccctgaacgaggacgtgttcacc
cctctgcggagctgcgagggccggcccatggccccggagatcgtgcagctgagcgagcag
atccaccgtctcctggtgcagccggtgcacagcggtgggtcgcagggctacagcagcctg
ggctcaaatggatcccgctcccacgagcagcagcacctcagcgccgcatcctcagtctcc
gacagcaagtccaccaacgccatggaggccatggaagcagccgtgattgccctgcacaaa
ccgatgacgttccagcagatctgtaaggacgtgcacatggtcaagaccagtgggcagcag
gtcttcgtcgactcctgcaaccgcaccccaccctggcgacacgccgtcaccacgctccga
gccatcaaaggagtggaccccatcaagagtcctgtccccaaggtggtgtgcccacccaaa
accccagtgcccaacaaccagcagctgttaaagaaggagccccccagtgactacagctac
caacagatcaactgtcttgacagcatcataaggtacttggacggctgcaatgttcccaac
actgtgaagaggaagtttggctcgtcctctggcacgtcaacatctgacaatgacaaactg
cagcacgaaacttttggcaatgcaaaaggtgatctagctattgcagtcaccctggtgggg
gactcggcgggggtggcgcccctgccccccctggccttgcacagccacaaggccgagagc
gtagcttcagtcacctcgcaatgcagcttcagcagtaccatcgtccacgtgggagacaag
aagcccccagagtcagatattgtaatggaagacgctcctcccattcctacactagccact
ccgacccccatcgccgtcatcgaccctcctcctcccccgcccagaatgacctcaccaccc
agccgaagaggtggcctgaccaagggcctgaccaaggaggtgctctctgcccacacgcag
caggaggagcaggccttcctctgtcgcttcagtgacctgagccagctaagggtgttcgac
ccagcctcagccctccgatgcccgctccccactaacgaccccctcgccacaggagcacgt
tgttctcgtgactaccctgcagcgggaggtagtcgtagacgcggccgcggagccaagaga
ctgaagcagcaagagtcctcagaacagagagaccctctggctatgggcatgaccgtaact
ctcaggggccccaacgtcagccctataaactcaccccccatctctacctaccccctgccc
ctggggcccaccaccaccacctcctcctcctggccagcctctgtgggatcccaggccagc
ctggcctccattccctaccccccagggatgcttcccatctaccctactctctcccagccc
atgggcatcccctccatgcagaaccagatggtacctcccatgatggccctggtgctgccc
aactacatgttcccccagcttaaccccaacatgacccagatggccacagccatgggcaca
cctatggacacagcgaggaacatgatgggaagccccatgtcccagccaggagccaccatg
gttacccccagcccacagcacttcttcaaccccaacgcaggtttccccttccccggtacc
aacgggatgccatgccccatgccaactatgccctcgctcatgcaaaccgccatgcccatc
caggcccaacggccagcctctggctccagcaccccccagtcgtgtagtcaagtaccggct
gaacgtgagggcccagagtcgcccctattccactctcgctgctcctcccccctcaacctg
ctgcagctggtggaggagttgcccagcaaccggctggaggtcgccacggcgctggctgct
gctgcgcaacaggccacgccacccgcacaagcgagtcatgagagatcggcagataactcc
aacgagaatgccaatgattccaaccaggatgtagagtccacctccagtgacctactggac
ctgctcctgcaggaggactctcgctcaggcaccggctcagccgcttctggctccgggttc
tctggatcagggtcttcaggatctgggtcctcgggctccaacggctgcagctcctcaggg
agtggaactagtcgcagtcagagcagccataccagcaagtactttggcagcattgactcg
tcagagaacgaccactccggcaagcagccagcaggtggcagtgcagcaggggaagacgga
gaggaacagttcatcaagtgtgtcctgcaggaccccatctggctcctcatggccaacacg
gatgacaaggtgatgatgacctaccagctacccaccaaggacagggagactgtgctgcgg
gaggaccgcgaggccctgcgggccatgcacaaacaccagccccgcttcactgaggaacag
aagagagacctgagccaggtccacccctggatacgcaccggtcgcctgccccgcgcctta
aacatctcagcatgtatggagtgcaagtctccccccactatcgtacccgctgctccgttt
gacgtggagatccacgagatggagctgtgcagcgtgctggagactacagaaaaggcctcc
actgctactcaggagaaagctcccttacccataaccgccatggaccagggaggtcaggag
catgtggcgcacgccaaaacacaaggcaacgaccaggaaatgacaacagaggagcaggaa
gtgacctcgctgacggaggaggagaaggcgagcgccgctgcagaaactgacatgacccac
tga

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