Coregonus clupeaformis (lake whitefish): 121554249
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Entry
121554249 CDS
T08357
Name
(RefSeq) transcription factor Dp-1 isoform X1
KO
K04683
transcription factor Dp-1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03083
Polycomb repressive complex
cclu04110
Cell cycle
cclu04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
121554249
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
121554249
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
121554249
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121554249
03036 Chromosome and associated proteins [BR:
cclu03036
]
121554249
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Helix-turn-helix
Fork head/winged helix cell cycle-controlling factors, DP
121554249
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
121554249
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DP
E2F_TDP
Motif
Other DBs
NCBI-GeneID:
121554249
NCBI-ProteinID:
XP_041723657
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All DBs
Position
4:complement(21929775..21953540)
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AA seq
443 aa
AA seq
DB search
MPTKQPPKKRVQSELVGDIRGSLSSDRAILSSDRMMAKDVGLMETNGELKVFIDQNLSPS
KGVLSLVAVHPASIPVAKQLLPKTLGLSNVNIAPHMVIGTPQRPSVSSAILVNSPHTPSS
QFLTQSQPADASPWSSGKRGKKGEKNGKGLRHFSMKVCEKVQKKGVTTYNEVADELVAEF
SAADNHISPNDSHVYDQKNIRRRVYDALNVLMAMNIISKEKKEIKWIGLPTNSAQECQNL
EVERQRRLERIKQKQSQLQELILQQIAFKNLVQRNRQTEQQTNRPPPPNSLIHLPFIIVN
TSKKTVIDCSISNDKFEYLFNFDSMFEIHDDIEVLKRMGMACGLEVGKCSPEDLKVARSL
VPKALEPYVTEMAQGPISKVYITGGSSTNGGRHHGQGSDSGADGTLASSSNDSHYSGSRV
ETPVSYMGDDDEEDDFDENDDED
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgccaacaaaacagccgccgaagaaaagagtgcaatcggaactcgttggtgacatcaga
ggttccctttcttcagacagagccatacttagttccgacaggatgatggccaaagatgtt
ggtctgatggaaaccaatggagaactgaaggtttttattgaccagaatctgagtcctagt
aaaggtgtcctgtctctggttgctgtccatcctgcgtccatccctgtggccaaacaacta
ctgcccaaaacactggggctctccaatgtcaacattgctccacacatggtgattggtacg
cctcagaggcccagtgtttccagtgccatactggtgaacagccctcacacacccagctcc
cagttcctcacacagagccagccggccgacgcttcgccttggtcatcggggaagcgtggt
aagaagggggagaagaatggcaagggcctgaggcatttctccatgaaggtgtgtgagaag
gtgcagaagaagggtgtcaccacctacaacgaggtagcagatgagctggtggcagagttc
agcgctgcagacaaccacatctcccccaacgactctcatgtgtatgaccagaagaatatc
cgtaggcgtgtgtatgatgcgctcaatgtgctcatggccatgaacataatctctaaagag
aagaaggagatcaagtggatcggtctgcccaccaactcggcccaggagtgccagaaccta
gaggtggagagacaaaggcgactggagagaatcaagcagaagcagtcacaactccaagag
cttatattacagcaaatagcctttaagaacctggttcagcggaaccgacagacagaacag
cagaccaacagacctccaccccccaactctctcatccacctcccgttcatcattgttaac
actagcaagaagaccgttatcgactgcagcatctccaacgacaagtttgagtacctgttc
aactttgacagcatgtttgagatccacgatgacattgaggtgctgaagcgcatgggcatg
gcttgtggcctggaggtgggcaagtgttccccggaggacctgaaggtggcacgcagcctg
gtgcccaaagccctggagccctacgtcacagagatggcccagggccccatcagtaaagtc
tacatcactggaggatcctccaccaacggggggcgccatcatggccagggcagtgacagt
ggtgcagatggtaccctggcctccagctctaatgactctcactacagcggctcccgtgtt
gagacccctgtgtcgtacatgggggatgatgacgaggaggatgactttgatgagaacgac
gatgaagattaa
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