Coregonus clupeaformis (lake whitefish): 121554280
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Entry
121554280 CDS
T08357
Name
(RefSeq) kin of IRRE-like protein 1 isoform X1
KO
K25874
Kirrel/Neph family protein
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cclu04515
]
121554280
Cell adhesion molecules [BR:
cclu04515
]
Immunoglobulin superfamily
Kirrel/Neph family
121554280
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
C2-set_2
V-set
Ig_5
C1-set
Ig_4
Syndecan
Ig_6
Motif
Other DBs
NCBI-GeneID:
121554280
NCBI-ProteinID:
XP_041723696
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Position
39:11541077..11570546
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AA seq
833 aa
AA seq
DB search
MHRLLLLSLALSFHRVWTARFSQEPADQSVVLGQRVILSCVVFNYSGIVQWTKDGLALGI
GEDLRAWPRYRVLRVQELGQYNLEIISAELSDDSLYECQAPDAALRSRRAKLTVLIPPDD
PVIDGAPEVLLNAGDHYNLSCVSRGAKPPAMIEWQKDGIPVDGAVSTTEVLPDRKRVTTH
SFLPIHPVDTDTGRNYSCVASNLAIPTGKRTTVTLNVHHPPTVTLSIEPRSVLEGDRVTF
TCAASANPPIMGYMWAKGGVILQGARESVLTTKADHSFFTEPVSCSVFNAVGKTNVSILV
DVHFGPILVVEPRPVTVDMDSDVALNCKWAGNPPLTLTWTKKGSNMVLSNNNQLFLKSVS
QADAGQYVCKAIVPRIGVGETEVTLTVNGPPIISSEPVQYAVRGERGEVKCYIASSPPPD
KIVWAWKENVWEKEKGTLLERYTVEQSKPLSEGGAVLSTLTINNVMEADFLSTYNCTAWN
AFGPGTMIIILEETEEVPVGIIAGGTVGCTILLFLCLLVLVLVFYRQRKGSRRGVTLGKP
DIKVETINKETHSLEEDSGSVSTASRMVKAMYSFLPSSVPFSPSSQPFKDDVELKQDLRS
DTLDTRQEYDLKDPTNGYYNVRASTHDEGRPASRSMHYSDYRSSNPAGGATSVSSSAGGS
GATASGGGPPGPGPLSTPGRPSCYDPRPPSRLSHNSYAQFNTFTRAGQSQQPPPNPPPQT
SDFPGDCSLLDSSQLAYDNYGYPSHPYTPYRMGFAPPTLAPLEAGPSYEMYGVGSGVGPV
PVVGPGVGVVPGAATSGSETGLGKYGSSTRFSYTSQHSDYGHRGHTQRMQTHV
NT seq
2502 nt
NT seq
+upstream
nt +downstream
nt
atgcacaggcttttgctcctgagtttggcgctgagttttcaccgtgtgtggacagcgcgt
ttctcccaggagccagcggaccagtcggtggtgctgggccagagggtgattttgtcctgt
gttgtgtttaactactcgggcattgtgcagtggaccaaggatggactggccctgggcatc
ggagaggacctcagggcctggccgaggtaccgtgtgttgcgggtgcaggagctgggccag
tataacctggagatcatctcagctgagctgtctgatgactccctgtacgagtgccaggcc
cctgatgctgcactacgttctagaagagccaaactcaccgtcctcatccccccagatgac
ccagtgatagatggggcccctgaggtgctgctgaatgcaggggaccactataacctgagc
tgtgtgtcccgcggggccaagccccctgccatgatagagtggcagaaagacgggatccct
gtagatggagcagtcagcactaccgaggtgctcccagacaggaagagggtgacgacccac
agcttcctgcccatccacccagtggacacagacacagggaggaactatagctgcgtggcc
agtaacctggctatccccaccgggaaacgcaccaccgtcaccctcaacgtacaccacccc
cccacggtgaccctgtccatcgagcctcgctccgtcctagagggggacagagtcaccttc
acctgcgcagcctccgccaaccctcctatcatgggatacatgtgggctaaaggtggagtg
atcctgcagggggccagagagagtgtgctcaccaccaaagctgaccattccttcttcact
gagccagtgtcatgctcagtgttcaacgccgtgggcaaaaccaacgtcagcatcctggtc
gatgtacactttggtcctattctggtagtggagcccagaccagtgacagtggacatggac
tctgatgtcgctctgaactgcaaatgggccggcaaccctcctctaacacttacctggacc
aagaagggctccaatatggtccttagtaataacaaccagctgttcctgaagtcagtgagc
caggcggacgctgggcagtacgtgtgtaaggccatcgtccccaggatcggagtgggagag
acagaggtcacgctcactgtcaacggtccccccatcatctccagtgagcccgtccagtat
gcggtgaggggggagagaggagaggtcaaatgctatattgccagctctccaccaccggac
aagattgtgtgggcgtggaaggagaacgtatgggagaaggagaagggaactctgttggag
aggtacacggtggagcagagtaaacctctgtctgagggaggggctgtcctctccaccctc
accatcaacaacgtcatggaggctgacttcctgtccacctacaactgtaccgcctggaac
gccttcggtcccgggaccatgatcatcatcctggaggagactgaggaggtcccagtgggt
ataatagcaggagggactgttggctgcaccatcctgctgttcctgtgtttactagtcctg
gtgctggtcttctaccgacagcgcaaaggcagtcgtcgcggggtcacgctgggtaagcca
gacatcaaggtagagacaataaacaaggagacccacagtctggaggaggactccggcagc
gtttccacggcatcgcgcatggtcaaggccatgtactcgtttctgccctcttctgtaccc
ttctctccctcctctcagccctttaaagacgatgtagaactgaaacaggacctacgcagc
gacacgctagacacgcgccaggagtacgacctgaaggatcccaccaacggctactacaac
gtgcgagcctccacccacgacgagggccgtcccgcctcccgctccatgcactactccgac
taccggtcctccaaccccgcagggggcgctacctccgtcagcagcagtgctggaggatca
ggggccacagccagcggaggaggccctccaggcccagggcccctctccacccctggccgc
cccagctgctacgacccccggcccccctccagactgtcccacaacagctatgcccagttt
aacaccttcacccgggctgggcagagccagcagccccctcccaatcccccgcctcagacc
agcgacttccctggggactgcagcctgttggactcctctcaactggcctacgacaactac
ggctatccctctcacccctataccccctaccgcatgggcttcgccccgcccactctggct
cccttggaagccgggccatcctatgagatgtacggggtggggtcgggggtggggcctgtg
ccggtggtggggcctggtgtgggggtggtgcctggggcagcaacgtcagggtcagagact
ggactggggaagtatggaagctctacccgcttctcctatacctcgcagcattctgactac
ggccacagaggacacacacagaggatgcagacacatgtgtga
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