Coregonus clupeaformis (lake whitefish): 121554299
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Entry
121554299 CDS
T08357
Name
(RefSeq) transcription factor Sox-19b
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121554299
Transcription factors [BR:
cclu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
121554299
BRITE hierarchy
SSDB
Ortholog
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
SOXp
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
121554299
NCBI-ProteinID:
XP_041723729
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Position
39:264231..269533
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AA seq
293 aa
AA seq
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MYNMMEHELKPSGQQQQHQTSQGMSPVTGNIGNSHPGSKSVCPPGGDPMDKVKRPMNAFM
VWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLTDAEKRPFIDEAKRLRAVHMKDYPDYK
YKPRRKTKPLLKKDNQMAKYPLSAGNLLAAQGQGGSARMESYGWGPAGGYAGMQNEALGY
TQQLHRYDLSALQYPQAMTAAQTYMNGANTYSPMSYSSSSQQPSPVMSMVKPEPVSHSPT
GGTNLHRGPLQGDLRDMISMYIPGGDTSDPAAQRGGYSVQQHYLSGTVPLTHI
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgtataacatgatggaacacgagctgaagccttctgggcaacagcagcagcaccaaacc
tcccagggcatgtccccggtcaccggtaacattggcaactctcacccggggtccaaatcc
gtatgccctccgggcggggaccccatggacaaggtcaaaaggcccatgaatgccttcatg
gtgtggtccaggggccagcgccgcaagatggcccaggagaaccccaagatgcacaattct
gagataagcaagcggctgggcgccgaatggaagctgcttacagacgcggagaagcggccg
ttcatcgacgaagccaagcgcctcagggcagtgcacatgaaggattatcccgactacaag
tacaagccacggcgcaagaccaagcccctgctcaagaaggacaaccagatggcgaagtac
cctctctccgccgggaacctgctggccgcgcagggccaaggtgggagcgctagaatggag
agctacggatggggcccagcgggaggttacgcggggatgcagaacgaggccctcggctac
actcagcagctgcaccgctacgacctgtccgcgctccagtacccccaggccatgacggca
gcacagacgtatatgaatggagccaacacctacagccccatgtcctacagcagcagctcc
cagcagcccagcccagtcatgtccatggtgaagccagagccggtgtcacactccccgact
ggtggaactaacctccaccgcgggccactccaaggggacctgagggatatgatcagtatg
tacatccccggtggggacaccagtgacccggccgcccagagaggaggctacagtgtccag
caacactatctcagtgggaccgttcccctcactcatatctag
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