Coregonus clupeaformis (lake whitefish): 121554307
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Entry
121554307 CDS
T08357
Symbol
slc1a1
Name
(RefSeq) excitatory amino acid transporter 3
KO
K05612
solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter), member 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
121554307 (slc1a1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cclu02000
]
121554307 (slc1a1)
Transporters [BR:
cclu02000
]
Solute carrier family (SLC)
SLC1: High-affinity glutamate and neutral amino acid transporter
121554307 (slc1a1)
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GFIT
Motif
Pfam:
SDF
Phage_holin_2_2
Motif
Other DBs
NCBI-GeneID:
121554307
NCBI-ProteinID:
XP_041723745
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Position
39:16210616..16224689
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AA seq
527 aa
AA seq
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MDMMGKKERRGWDFKGLLKRNWLLIATIVSVVLGIGLGVVVREYASLSHLHKQYFGFPGE
ILMRMLKLVILPLIISSMITGVAALDSEVSGKIGLRAVVYYFSTTIIAVILGIVLVMAIK
PGVSQEAEHIDRTGTTPNVTTVDTLLDLVRNMFPENLLQACFQQYKTKRKELEPPKVKGN
TTTFPPLSTTVMATIFPSENITKDYKIVGSYSDGINVLGLIVFCVAFGLVIGKMGERGRI
LLEFFDALNEATMRLVQIIMCYMPVGILFLIAAKIIEVEDWEIFRKMGLYMVTVLSGLAI
HSTICLPLIYFAIVRKNPYTFTLGMAQAMVTALMISSSSATLPVTFRCAEENLRIDKRIT
RFVLPVGATINMDGTALYEAVAAIFIAQLNDYALDVGQIVTISITATVASIGAAGVPNAG
LVTMVIVLTAVGLPANDVTLIVAVDWLLDRFRTMINVLGDAYGAGIVQKLSRRELERMDV
TSDVDVTNPFVLETTLDDEECEKKSYVNGGFTIDKTDAISFTETSQF
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atggacatgatggggaagaaagaacgcaggggctgggacttcaaaggcttgctgaagagg
aactggctgcttattgcgaccattgtgtcggtggtgttagggataggtcttggggtggtg
gtcagggaatatgcctccctctcccacctccataagcagtattttggcttcccgggtgag
atcctgatgcggatgctcaagctggtcatcctacccctcatcatctccagcatgataaca
ggagtcgccgccctggattcggaagtttctggaaagataggtctgagggctgtggtatat
tacttctccaccaccatcatcgcagtcattctgggtattgtgttggtgatggccatcaaa
cctggtgtctctcaggaggcagaacatatcgacaggacagggaccacaccaaacgtcacc
accgtcgacactctactggatcttgtcagaaacatgtttcctgaaaacctactgcaggct
tgtttccaacagtacaagacaaagcgcaaagagctggaaccacctaaagtgaaggggaac
actacaacgttccctcctctctctaccactgtcatggcaaccattttcccctcagagaac
atcaccaaggactataagatagtcggttcatattctgatgggatcaacgtgctgggcctc
atcgtgttctgtgtggcgttcggccttgtcatcggcaagatgggcgaaagggggcgtatc
ctgctggagttctttgacgctttaaacgaggccaccatgaggctagtccagattatcatg
tgctacatgccagtggggatactcttcctgatcgctgccaagatcatcgaggtagaagac
tgggagatcttcagaaagatgggcctgtacatggtgacagtgctgagtggcctagctatc
cactccaccatttgtctgccgctgatctactttgccattgtgaggaagaacccatatacc
tttaccttagggatggcccaggcaatggtcactgctctcatgatctcttccagctctgcc
accctgccggtcaccttccgctgtgccgaagagaacctcaggatcgacaagaggatcacc
cgcttcgtgctgcctgtgggcgccactatcaacatggatggcacggctctctacgaggcg
gttgctgccatcttcattgcccagctcaacgactacgctctggatgtgggtcagattgtc
accatcagtataacagcaactgtagccagcatcggagctgccggtgtacctaacgctggc
cttgttaccatggtgattgtgctgactgccgttggactaccagcaaatgatgtcacttta
attgttgctgtggattggctactagaccgcttccgcaccatgatcaatgtgctgggggat
gcctacggagctggcatcgtccagaagctgtccaggcgggagctggagaggatggacgtc
acctcggatgtggacgtgaccaaccccttcgtcctggagaccacgctggacgacgaggag
tgcgagaaaaagtcctatgtcaatggcggcttcaccatcgacaagaccgacgccatctcc
ttcaccgagacttcccagttttag
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