Coregonus clupeaformis (lake whitefish): 121554329
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Entry
121554329 CDS
T08357
Name
(RefSeq) lysosome-associated membrane glycoprotein 1
KO
K06528
lysosomal-associated membrane protein 1/2
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03272
Virion - Hepatitis viruses
cclu03273
Virion - Lassa virus and SFTS virus
cclu04140
Autophagy - animal
cclu04142
Lysosome
cclu04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
121554329
03272 Virion - Hepatitis viruses
121554329
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
121554329
04142 Lysosome
121554329
04140 Autophagy - animal
121554329
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121554329
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cclu04147
]
121554329
04090 CD molecules [BR:
cclu04090
]
121554329
Membrane trafficking [BR:
cclu04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
121554329
Autophagy
Chaperone mediated autophagy (CMA)
Cargo receptors
121554329
Other autophagy associated proteins
RNautophagy/DNautophagy
121554329
Exosome [BR:
cclu04147
]
Exosomal proteins
Exosomal proteins of hepatic cells
121554329
CD molecules [BR:
cclu04090
]
Proteins
121554329
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lamp2-like_luminal
Lamp2_2nd
VAS1_LD
Motif
Other DBs
NCBI-GeneID:
121554329
NCBI-ProteinID:
XP_041723782
LinkDB
All DBs
Position
4:complement(21971678..21981536)
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AA seq
253 aa
AA seq
DB search
MKQHSRKQLLSLAFIAFLAVTLHQSFAATDVPPTAAAPQTTALPPAPPARPERGNYTVTN
GNGTVCLMARMGLQLNIRFSSASLNNTVQDVVNLQPNVTKSSGSCDSDSATLMLMADEEK
TNLTFLFSLNATSSKYHLSGVILSAVWLDMSEPFSASNSSLDYLRGTLGHSYVCHEEQTL
AVAVNFSLNTFQLQVQPFGLTRDQFGAAEECQLDEDDMLIPIIVGAALASLVLIVLVAYL
IGRKRSHAGYQTI
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaacatagccgcaaacaactcttgtccctggcgttcatcgcgtttttagcggtc
acgttgcatcagagctttgctgccactgatgtcccgcccactgctgctgcccctcaaacc
acggctctgcctcctgcgcccccagcccggcctgagaggggcaactacactgtaaccaat
ggcaacgggaccgtctgtctgatggcccgtatgggactgcagctcaacatccgcttcagc
tctgcctctctcaataatactgtgcaagacgtggtgaacctccagcccaacgtgactaag
agctcagggtcatgtgactcggacagtgccaccctgatgctgatggctgatgaggagaaa
accaacctcaccttccttttctccctgaatgccacgtccagtaagtaccacctgagtgga
gtgatcctgtctgcagtctggctggacatgagtgagcccttctcagccagtaacagtagt
ctggactacctgcgcggtaccctggggcatagttacgtgtgtcatgaagagcagactctg
gctgtggctgtgaacttctctctcaacaccttccagctgcaggtgcagcccttcggccta
accagggaccagtttggagcagcggaggagtgtcagctggatgaggatgacatgttgatc
cccatcatcgtgggcgctgcgctggccagcctggtcctcattgtccttgtggcctacctt
atcggcaggaagaggagccacgccgggtaccagactatctga
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integrated database retrieval system
