Coregonus clupeaformis (lake whitefish): 121554355
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Entry
121554355 CDS
T08357
Name
(RefSeq) LOW QUALITY PROTEIN: serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit beta isoform
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03015
mRNA surveillance pathway
cclu04110
Cell cycle
cclu04114
Oocyte meiosis
cclu04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
121554355
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cclu01009
]
121554355
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cclu03019
]
121554355
03036 Chromosome and associated proteins [BR:
cclu03036
]
121554355
Protein phosphatases and associated proteins [BR:
cclu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
121554355
Messenger RNA biogenesis [BR:
cclu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
121554355
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
121554355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B56
Motif
Other DBs
NCBI-GeneID:
121554355
NCBI-ProteinID:
XP_041723844
LinkDB
All DBs
Position
Unknown
AA seq
514 aa
AA seq
DB search
METTKLPPTSPSSPTTGFSVPSAEKVDGFPRRSMRRARQRRSHSSSQFRYQSSQVELTPL
PLLKDAPVAELHNLFCKKLQQCCVLFDFLDCVADLKGKEIKRAALNELVESVATSRGVLI
EPLYPETIKMISVNIFRTLPPSENPEFXPEEDEPTLEASWPHLQLVYEFFLRFLESPDFQ
PSMAKRYVDQKFVLQLLELFDSEDPREREYLKTILHRVYGKLLGLRAYIRKQINNIFLRF
IYETEHFNGVAELLEILGSIINGFALPLKSEHKQFLVRVLIPLHTAKSLSIFHAQLAYCV
VQFMEKDATVTEYIIRGLLKYWPKTCTQKEVMFLGEIEEILDVIEPSQFIRVQEPLFKQI
AACISSPHFQVAERALYFWNNEYILSLIEENSQVILPLVFTTLYRVSKEHWNQTIVSLIY
NVLKTFMEMNSKLFDDLTASYKVDKQKELKRERERAELWRGLEEQQERRLQTLGETSRNQ
KNLQERGEPPQPSSPQTALPKQLDLKSSGPYSTT
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atggagacgaccaaactgcccccgaccagcccttcctccccgaccaccgggttctcggtt
ccgtcagcggagaaggtggatgggtttccccggcggtcgatgcgcagagcccggcagagg
cgctcccactcctcgtcccagttccgctaccagagctcccaggtcgagctgacgccgctg
ccgctactcaaagatgcccctgtggcagagctccataacctgttctgtaagaagctgcag
cagtgctgcgtcctctttgacttcctggactgtgtggccgacctcaaggggaaggagatc
aaacgagctgcgctcaatgagctggtggagtctgttgctaccagcagaggagttctgata
gagccactctacccagagactattaagatgatctcagtgaatattttcaggactttacct
cccagtgagaacccagagtttngaccggaggaggatgagcccaccctagaggcctcctgg
ccacacctacagctggtgtatgagttctttctgcgtttcctggagagcccagacttccag
ccctccatggccaaacgctacgtcgaccagaagtttgttctacagctgttggagttgttt
gacagtgaggatccgagggagagagagtatctaaagaccatcctgcatcgtgtctatggc
aaactgctgggcctgcgggcgtacatacgcaaacagatcaacaacatcttcctcaggttc
atctatgagactgagcacttcaacggagtagcagagctactggagattctgggcagcatt
ataaacgggtttgcgctacccctgaagtcggaacacaagcagttcctggttcgagtcctg
atccctctacacacagccaagtccctgtccatcttccacgcacagttagcgtactgcgtg
gtccagtttatggagaaagatgccacagtcacagaatacatcatacgagggctcctcaag
tactggcccaaaacctgcacccagaaagaggtgatgttcctaggggagatagaggagata
ctggatgtgattgagccgtctcagtttatccgtgttcaggagcctctcttcaaacagatc
gctgcctgcatctctagcccacacttccaggtagcagagagggctctgtacttctggaac
aatgagtacatcctgtctctgatagaagagaacagtcaggtgattctaccgctggtcttc
actacactctacagagtctccaaggagcactggaaccagacgatagtctctctaatctac
aatgttctgaagacctttatggagatgaacagcaagctgtttgatgacctcactgcctct
tacaaagtggacaaacagaaggagttgaagagggagcgtgagcgtgcagagctgtggcgg
ggcctggaggagcagcaggagaggaggctgcagaccctgggggagaccagtcgtaatcag
aagaacctccaggagagaggggagcctcctcagccctcctccccacagacggcactccct
aagcagctagacctcaagtccagtggaccctactccaccacctag
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