Coregonus clupeaformis (lake whitefish): 121554392
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Entry
121554392 CDS
T08357
Name
(RefSeq) homeobox protein HMX1-like
KO
K09349
homeobox protein Nkx-5
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121554392
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
121554392
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
121554392
NCBI-ProteinID:
XP_041723895
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All DBs
Position
39:17709663..17712508
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AA seq
296 aa
AA seq
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MLDKAPESEHHGPTSRSSSFSIENLLRSTTRTTDRRSTAEDEGDCKETGLSYNQVAVIES
RCSQVERQVSYFGLNAQRHWCGTSPNKACSDLQSPQCHSSNSDDPGYSLKTSNRDSPTLP
EPVEDNDQPDERAEGSLTDDKDDETGSSCFAREDSETADTKAACKKKTRTVFSRTQVFQL
ESTFDMKRYLSSTERAGLAASLQLTETQVKIWFQNRRNKWKRQLAADMEATSISYSAQRI
VRVPILYHENAAPGTLSVNLAQVSPPLVGFSSTVNYPVSQFTHPMSFIRSQITGLV
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgcttgataaggcaccggagtctgaacatcatggtccaacgtcaagaagttcatcattt
tccattgagaatttacttcggtctactaccaggactacagacaggcgttctacggccgaa
gatgagggggactgtaaggaaaccggactctcttacaaccaagtcgctgtcattgagagc
cgctgcagccaagtggagcgtcaagtgtcttactttggattaaacgcccaacgccactgg
tgtgggacatcgccaaacaaagcttgcagtgatttacagagtccgcagtgccattccagc
aactcagatgatcccggatactccctaaaaaccagcaaccgggattctcccactctacca
gagccggtggaagacaacgaccaaccggatgagagggcagagggcagtctgacagatgac
aaggatgacgaaacagggtcttcctgcttcgcacgagaagacagtgaaacagctgatacg
aaagcagcttgcaagaagaagacccgcaccgtgttcagccggactcaggttttccagctg
gagtccaccttcgacatgaaacgctacctgagcagcaccgagcgggcggggttggccgcc
tctctacagctcaccgagacgcaggtcaagatttggttccagaatcgcaggaacaagtgg
aagagacagctagctgccgacatggaggccacgagcatctcgtattcggcccaaaggatt
gtcagggttcctattctataccacgagaacgcggcacctgggacactgagcgtaaacctg
gcacaggtgtcgccacccttagtgggtttctcgagtactgtgaattatcccgtctcccag
ttcacccaccccatgtcttttataagatcacagatcacaggccttgtgtga
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