Coregonus clupeaformis (lake whitefish): 121554432
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Entry
121554432 CDS
T08357
Name
(RefSeq) RNA-binding protein 4B-like isoform X1
KO
K13187
RNA-binding protein 4
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cclu03041
]
121554432
Spliceosome [BR:
cclu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
121554432
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_occluded
RNA_bind
RRM_7
Calcipressin
Motif
Other DBs
NCBI-GeneID:
121554432
NCBI-ProteinID:
XP_045067924
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Position
39:20269399..20272319
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AA seq
349 aa
AA seq
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MVKIFIGNLPREADKDEIQALFSQYGAVTECAIVKNFAFVHMDDRKSATKAIRSLHLYKL
HGTAINVEASRGKNQGAVKLHVTNVEKGNDDELRTLFEEYGTVSECAIVKNFAFVHMDNS
DEALDAIKGLDNVEFQGKRIHVQISKSRPRYEEEEDYPPPPPERGGYWPPRGYPGERHDP
PPPSYLRGRHPPPHHGYPAPPPPPPPPRRAPYPERAYERERQSYAVVDYYEKYRARPAPY
GIMSYDERRVGSLPPPPPPPSSMVRERFMTSGLDPYERRPLHPPPSAYYARDRSPIRRAP
PPPMPHAGNGYSYERSRLSPISRPAMYNLPRTRDPYADRLPPPPATRYY
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atggtcaagatcttcattgggaaccttcctcgggaggctgacaaggatgaaattcaggca
ttgttctcccagtacggtgccgtcacagaatgcgccatcgtcaagaattttgctttcgtc
cacatggatgaccgtaagtctgccaccaaagccatccgcagcctgcacctctacaagctg
cacggcacggcgataaacgtcgaggctagtcgcgggaagaaccagggagctgtcaaactc
cacgtaacaaacgtggagaaaggcaatgatgatgagctccgcactttgttcgaggagtat
ggcacagtgtctgaatgtgctattgtcaaaaactttgcatttgtgcacatggacaactcc
gatgaggctttggatgccatcaagggattagacaacgttgaattccaggggaaacgtatc
catgtccagatatcaaagagccgtcccaggtatgaggaggaagaagactaccccccaccc
ccacctgagagggggggttactggcccccccgtggctaccccggggagaggcatgatccc
ccaccccctagctatctaagaggtcgtcacccaccccctcatcacgggtaccctgccccc
cctccaccaccccctccccctagacgagccccttacccagagcgtgcttatgagcgcgag
aggcagagctatgctgtggtggattattatgagaaatacagggctcgacctgccccttac
ggcataatgtcctatgatgagaggcgtgtaggctccttaccccctcctcccccgcccccc
tcttccatggtcagggagcgtttcatgacctctggcctcgacccatatgagcgtcgcccc
ctccatcctcccccgtccgcgtactacgccagggaccgcagtcccattcggagagcccct
cctccccccatgccccatgccggtaacggttactcctacgagcgttcccgactgtccccc
atctctcggcccgcgatgtacaacctaccccgtaccagggacccctacgccgacaggttg
ccaccgccgccagcgactcgctattactaa
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