Coregonus clupeaformis (lake whitefish): 121554433
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Entry
121554433 CDS
T08357
Name
(RefSeq) RNA-binding protein 4B
KO
K13187
RNA-binding protein 4
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cclu03041
]
121554433
Spliceosome [BR:
cclu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
121554433
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_occluded
RNA_bind
RBD_RDR6
RRM_7
Calcipressin
RRM_PARP14_3
RRM_MARF1
Motif
Other DBs
NCBI-GeneID:
121554433
NCBI-ProteinID:
XP_041723954
LinkDB
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Position
39:20258739..20265118
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AA seq
345 aa
AA seq
DB search
MVKIFIGNLPNEVEKDEIEALFTQHGTVTECAKFKNYAFVHMDDRKSATKAIRSLHLLKL
HGRPINVEPSRGKNQGPVKLHVANVEKGNDDELRTLFEEYGTVTECAIVKNFAFVHMSNS
DEAKDAIKGLDNSDFQGKRIHVQMSKSRPRGEEEDYGPPPDRCAYWPAPRGYPGDRGQPE
PPHYRGRMSGGYPGLPPPPPPPRRAPYPPERAYERERESYAVVDYYEKYRARPAPYGGLS
GYGDERRFGSIPPPPPPSVMVRERLAASSLDPYERRTLPPLSYYSRDRSPIRRPSPPPMP
PAGNGYSYERSRLSPLSRPAMYNLPRTRDPYADRVPPPPPARYSY
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagatctttattggaaacctccctaacgaggtcgaaaaggatgagatcgaggcg
ctgtttactcaacatggcacagtgacagaatgtgcaaagttcaaaaactatgccttcgtc
cacatggatgaccgtaagtctgccaccaaagccatccgcagcctgcacctcttaaagctt
catggcaggccaatcaatgtggagccaagcaggggaaagaaccagggtccggtgaaactt
cacgtggccaatgtggagaaaggcaacgatgatgagctccgcaccttgttcgaggagtat
ggcacagtcacagaatgtgctattgtcaaaaactttgctttcgtccacatgtccaactcg
gatgaggccaaggatgccataaagggattagacaactctgacttccaaggcaaacgtatt
cacgttcagatgtcaaaaagccgtcccagaggggaggaagaggattatggccccccacca
gataggtgtgcatactggccagcacctcgtggctaccccggggacagggggcagcctgag
ccccctcattacagaggtcgcatgtcaggggggtaccctggcctccctccaccaccacct
ccccctagacgagctccgtacccccccgagcgtgcctatgagcgcgagagggaaagctac
gcggtggtggattactatgagaagtacagagctcgccctgccccttatggtggcctctca
ggctatggagatgagaggcgctttggctccatacccccaccaccacccccttctgtcatg
gttagggagcgccttgcggcctcctcactcgacccgtacgagcgtcgcaccctcccacct
ctgtcctactactcccgtgaccgcagtcccatcagaagaccctctcctccccccatgcca
cccgctggtaacggctactcatatgagcgctcccggctctctcctctgtccaggcccgca
atgtacaacctaccacgtaccagggacccctacgctgacagggtccctccaccgcctcct
gcccgctactcttactga
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