| Entry |
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| Name |
(RefSeq) LOW QUALITY PROTEIN: nuclear pore complex protein Nup50
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| KO |
| K14295 | nuclear pore complex protein Nup50 |
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| Organism |
cclu Coregonus clupeaformis (lake whitefish)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:cclu00001]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121554490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:cclu03019]
121554490
Messenger RNA biogenesis [BR:cclu03019]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
121554490
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
39:20524835..20541816
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| AA seq |
470 aa
MAKRIADKELTDRNWDQEDEGEEQAGTFSIASDDVMKSRPIKKAKRRAAGSEGQSGGSFK
GFKGFSWPLRRNPGQPRGITAFSGFGNGAGFKLSNGNSVTPVTPAFTGFASPAATKTTTP
GSLTFSGPPSSGDITEQQPNGSSPVVSSLSLSSGSCTSSDNQEYRKQLTALNCSVRDWIT
KHVNRNPLCDLNPIFRDYEKHLASIDKKYGGAGGSGAGTGGSASGSKAAAPEEKQPAGTT
PPSSSSTAGSAATAPLFSFSKDKDGTTPASEKSSSAAPAPLPAGISFNLGQKALSSGGSP
NVSFSSSSSSSSLFGGTSLPSFSFSGAKAEAVPTQTTEENGEESDEPPKVEVQEIKESDA
FYSKKCKLFYKKETEFKEKGVGTLHLKTTPEGKTQLIVRADTNLGNILLNIMVQASIPCS
RMGKNNVMVVCVPNPVVDHSNPTNPVAMLIRVKTAEDADELHNILEEKKV |
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| NT seq |
1413 nt +upstreamnt +downstreamnt
atggcgaagaggatcgctgacaaagagctgaccgacaggaactgggatcaggaggatgaa
ggagaggagcaggcagggacgttttccatcgctagtgatgatgtcatgaagagcaggccc
atcaagaaggccaagcgtcgggctgctggttcagaggggcagagtggaggatcgttcaaa
gggtttaaagggttctcctggcccctccgtcggaacccgggccagccacggggaatcacg
gccttctccgggttcgggaatggggcagggttcaaactgtccaatgggaacagtgttaca
cccgtcactccagccttcaccgggttcgcctcgcctgctgccaccaagaccaccacacct
ggttcattaacattcagcggccccccctccagcggtgacatcacagagcagcagcctaac
ggttcctcccccgtggtttccagtctgtctctgagctccggctcctgtacctcctctgac
aaccaggagtacaggaagcagctcacagcgctcaactgctcggtcagggactggatcacc
aagcacgtcaacagaaaccctctctgcgacctcaaccccatcttcagggactatgagaag
cacctggccagcatcgacaagaagtacggaggggctggagggagtggcgctgggactggg
ggctcggcgagcggtagcaaggcagcagcaccggaggagaagcagccagccggtaccaca
cccccctcctcctctagtaccgccggctcggcagccacagctccactcttctccttcagc
aaggacaaggacggcaccactccagcctcggagaaaagctccagcgccgctcctgctccg
ctccccgctggcatcagctttaacttgggccagaaggctctgagctctggaggatctcct
aacgtctccttctcctcctcctcctcttcctcctccctgtttggaggcacctctcttcct
agcttctccttcagtggggccaaggctgaggctgtccccacccagacaacagaggagaat
ggagaggagtctgatgaaccacccaaggttgaagtccaagagatcaaggagtctgatgcc
ttctactctaagaagtgtaaactgttctataaaaaagagactgagttcaaggagaaggga
gttggaacgctgcatctgaaaacaaccccagagggaaagactcagctgatagtccgcgct
gacactaacctgggtaacatcctgttgaacatcatggtccaggcctccataccgtgttcc
aggatggggaagaacaacgttatggtggtatgtgttcctaaccctgtggtggaccacagc
aaccctaccaaccctgtcgccatgctcatcagggtgaagacagcagaggacgctgatgaa
ctgcacaacatactggaggagaagaaagtttag |
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