Coregonus clupeaformis (lake whitefish): 121554576
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Entry
121554576 CDS
T08357
Name
(RefSeq) semaphorin-4F-like
KO
K06521
semaphorin 4
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
cclu04090
]
121554576
CD molecules [BR:
cclu04090
]
Proteins
121554576
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GFIT
Motif
Pfam:
Sema
Sema4F_C
PSI
Ig_5
Motif
Other DBs
NCBI-GeneID:
121554576
NCBI-ProteinID:
XP_045063898
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Position
27:complement(51246311..51262407)
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AA seq
818 aa
AA seq
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MLGPQQFRGVANFSTFLLDRSSGVLFLGARDAILAVDTNNLAQPPRTIVWDVPEEKRRSC
VAKGKTEGDCNNYIRLLEFLGDGWIYACGTYAFDPQCAFVNVSSFSLERGEDGGVRMETG
KGKCPFEPSQHYTAVMAGGILYTAATSNFLGTLFDISRATGQEQERIRTERSINWLSDPE
FVSSVFIEQDEDNNPTGDDNKIYFFFTEVAKEYDLYTKVKVPRVARVCKSDVGGMKTLQR
RWTTFLKAQLVCEDRASGQRYNILTDVYTTQHTSGDPSSTHFYGLFTSQWEYEELSAVCV
YSLADISKVMDGPFKELKKTCENWINPEPVPTPRPGQCLNSALRAEGFESSLKLPDKVLT
FMRDHPLMENSVIAVPILVRRGVTYTKVAVTRTTTLSQSNAATVLHLGTDRGELHRVVVV
GHNTTLLQEIPLFSEQEPVNNILLHKGQALVGTPLSLARVGAEGCSLYTNCEVCARARPL
GCVWRAKEGTCGPSMTEPIQGEEVEDALKLCDSGEGRCSPALRELRVSVGLHVLLPCVQV
SPRPCTWEHPPHRHTRQHHSDLEVTVTVESLGTYTCLCQEGGPGGKEESPACRRASYHLT
LEDPSAGGAVATAGGRHLLVIYILCFSLGVAIGGFLLHCLSRQRGIGQRHPDHSLSSEKG
QDLLGSSATPQSPSSASLLSEGFPLTEKRGNGTLLLTHHHNNGNDGHHGNYGIVGSNGGY
NGNRGNGGGHGNGGYANNANCNVQTAASAVDGLKLHVQEMVTGERSGGERESGRPERGQG
DEEDEGLGEGLVGLEEELAGFALFKLPAPLAQCEESSI
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atgttggggccgcagcagttcaggggcgtggccaactttagcacattcctattggaccgt
tcgtctggcgttctcttcctgggtgcgagagatgccatactggccgtggacaccaacaac
ctggcacagccaccacgcacgattgtgtgggatgttcctgaggagaagaggaggtcctgt
gtggccaagggaaagacagagggtgactgtaataactacatccgtctgttagagtttctt
ggagacgggtggatctatgcctgtggaacctacgcttttgacccacaatgtgccttcgtg
aacgtgtcttcattctctctggagcgaggggaggatggaggggtgaggatggagaccggg
aaagggaaatgtccctttgagcccagccagcactatacagctgtaatggcaggaggtatc
ttgtacacagctgccaccagtaacttcctgggaacgttgttcgatatctcccgggcaacc
ggacaggagcaggaacgtatccgcaccgagagatccatcaactggctcagtgacccagag
ttcgtgtcctcagtgttcatagagcaggacgaagacaacaacccaacaggagacgacaac
aagatctatttcttctttacagaggtcgccaaggagtacgacctctacactaaggtcaaa
gttcccagggtcgcacgtgtctgcaagtctgatgtaggtggtatgaagacattacagagg
cgttggaccaccttcctcaaggctcagttggtgtgtgaggacagagccagcggacagcgt
tacaacatactgaccgatgtctacacgacacaacacacatctggagaccctagctcaaca
cacttctacggtctcttcacttctcagtgggagtatgaggagttgtcagcggtgtgtgtg
tacagtctggctgacatcagtaaagtgatggacggaccctttaaggaactgaagaagacc
tgtgagaactggatcaacccagaaccagtaccaacacctagaccaggacagtgtctgaac
agtgctctgagagcggagggcttcgagtcttctctcaagctgccggacaaggtgttgacg
tttatgagagaccaccctctgatggagaacagtgtgatcgcagtgcctatactggtgagg
aggggagtcacatacactaaagtagctgttaccaggacgaccacgctgtcgcagagcaac
gcagccaccgtgctgcacctgggaacagatcggggggagctccacagagtagtggtggta
ggacacaacactacgctactacaggagatacctctcttctctgaacaggaacctgtcaac
aacatactgctacacaaggggcaggctctagtaggtacccccctatccctggcccgtgtg
ggggcagaggggtgcagcctgtacaccaactgtgaggtgtgtgcccgggctaggcccctg
gggtgtgtgtggagggccaaagagggaacctgtggccccagcatgacagagcccatccag
ggagaggaagtagaggatgctctgaagctgtgtgacagtggagaaggtcgttgttcccct
gccctgagggagctgcgtgtctctgtgggtctccatgttctgttgccctgcgtccaggtg
tcaccacgcccctgtacctgggaacacccaccacacagacacacccgtcagcatcactct
gacctggaggtcactgtcacagtggagagcctggggacatacacatgtctatgtcaggag
ggtggaccagggggtaaggaggagagtcctgcctgtcgcagagcctcctaccatctcacc
ctggaggatcccagcgctgggggggccgtggccacggctggaggacgtcacctactggtc
atctacatactctgcttcagcctgggcgttgccatcggtggctttctcctccactgcctt
tcccgccaacgcgggattggccagcgccacccagaccactccctttcctctgagaaaggg
caggacttgctgggctcctcggcgacgccgcagtcacctagcagtgccagtttgctgtcg
gaggggttcccattaacggagaagagaggaaatggaacgctgctactgacacaccaccac
aacaacggcaacgatggtcaccacggcaactacggcatcgttggcagcaacggcggctac
aacggtaaccgtggcaacggcggcggccacggcaacggtggctacgccaacaacgctaac
tgtaacgtgcagacggcagcgagcgctgtggatgggctgaagcttcacgttcaggagatg
gtgacgggggagaggagcgggggagagagggagagcgggaggccggagagaggacagggg
gatgaggaggacgaggggctgggggaggggttggtgggactggaggaggaattagcgggg
tttgcgttgtttaagttaccggcaccattagcccagtgtgaggagagttccatctga
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