Coregonus clupeaformis (lake whitefish): 121554596
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Entry
121554596 CDS
T08357
Symbol
pknox1.2
Name
(RefSeq) homeobox protein PKNOX1
KO
K24891
homeobox protein PKNOX
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121554596 (pknox1.2)
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
121554596 (pknox1.2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Meis_PKNOX_N
Homeobox_KN
Homeodomain
Mpp10
SPT6_acidic
Motif
Other DBs
NCBI-GeneID:
121554596
NCBI-ProteinID:
XP_045062324
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All DBs
Position
22:complement(4175545..4183104)
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AA seq
484 aa
AA seq
DB search
MMEAQSASLDEYPEVDQVLVQMRVGADEEGDPEQSLTEGGAGSPSATQPQTPMDTDKQAI
YRHPLFPLLALLFEKCEQSTQSSDCVSSASFNVDIENFVRSQKKEGKGFFCDDPDVDNLM
VKAIQVLRIHLLELEKVSDLCKDFCSRYIACLRTKMNSETLLSGGETDSPCSPVQIQTSS
PLTGTLSPQGIVMSASALQQGNVTLTTVNSAGQVLAGGTVYQPITVVTPQGQVVGQAISP
QTIRINNTQLQLQLNQDLSSFFTQEDSSSKSNKRGVLPKSATNIMRTWLFQHIGHPYPTE
DEKKQLAIQTNLTLLQVNNWFINARRRILQPMMDSSASDTPKSRKRTPQSRPTQRFWPMA
NNIASAGVGQEVAMDDDVTMVTMGMSVDELQTLTSDSATLAMQQVMMGGHSEEEEGESER
RKKKKKRKRRRGVTWPDWSDIPLQRNVMSHPHACLCLTILLNTHHSVQDYPQKNTLFLYV
KCLE
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgatggaagcccagtcggcatctctagatgagtacccggaggtagatcaggtcttggtg
cagatgcgcgtgggagcggatgaggagggggatccggagcagagtctgaccgagggggga
gcaggcagcccctctgccacgcagccccagacacccatggacacagacaagcaggccatc
tacaggcaccccttgttccctctgctggccctactctttgagaagtgtgagcagtcaact
cagagctcggactgcgtcagctctgccagcttcaatgtggacattgagaactttgtccgc
agccagaagaaagagggcaagggcttcttctgtgacgacccagacgtggacaacctgatg
gtgaaggccattcaggtgctgcgtatccacctcctggagctggagaaagtgagtgacctg
tgtaaggacttctgtagccgctacatcgcctgcctgcgcaccaagatgaacagtgagacc
ctgcttagtggaggagaaacggacagcccctgttcccctgtccagatacagacctccagc
ccactcacaggaaccctcagccctcaaggcattgtgatgtcagcctcggccctgcagcag
ggcaacgttaccctgacaacagtcaattctgctggccaagtgttagcaggtggtacagtg
taccagcccattacagtagtcacgcctcagggacaggtggtgggacaagctatctcaccc
cagacaatacgcatcaacaacacacagctccagttgcaactcaatcaggacctgagcagt
ttcttcacccaggaggacagctcatccaagagcaacaagaggggcgtcctgcccaaatca
gccaccaacatcatgcgtacctggctcttccagcacatagggcatccctatcccacagag
gacgagaagaaacagctcgccatacagaccaacctgaccctgctgcaggtcaacaactgg
ttcattaatgctaggaggcgtatcctccagcccatgatggacagcagtgcgtcggacacg
cccaagagcaggaagaggactccccagagccggcccacccagcgtttctggcccatggcc
aacaacattgcctcggccggcgtagggcaagaggttgccatggacgatgatgttaccatg
gtgacgatgggcatgagtgtagacgagctgcagacgctgacatcagacagtgcaacactg
gccatgcagcaggtgatgatgggaggacacagcgaggaggaggagggcgagagcgagagg
aggaagaagaagaagaagaggaagaggaggaggggggtgacatggccggattggagtgac
ataccactacagcggaatgtgatgtcacaccctcatgcatgcctgtgtttgactatatta
ctcaacactcatcacagtgtccaagactacccacaaaaaaatacgctatttttatatgta
aaatgtttggaatga
DBGET
integrated database retrieval system
