KEGG   Coregonus clupeaformis (lake whitefish): 121554680
Entry
121554680         CDS       T08357                                 
Name
(RefSeq) dynactin subunit 1 isoform X1
  KO
K04648  dynactin 1
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu04814  Motor proteins
cclu05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09140 Cellular Processes
  09142 Cell motility
   04814 Motor proteins
    121554680
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    121554680
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cclu04131]
    121554680
   03036 Chromosome and associated proteins [BR:cclu03036]
    121554680
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:cclu04812]
    121554680
Membrane trafficking [BR:cclu04131]
 Endosome - Golgi transport
  Rab GTPases and associated proteins
   Rab associated proteins
    121554680
Chromosome and associated proteins [BR:cclu03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Dynactin complex
     121554680
Cytoskeleton proteins [BR:cclu04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Dynactins
     121554680
SSDB
Motif
Pfam: Dynactin CAP_GLY
Other DBs
NCBI-GeneID: 121554680
NCBI-ProteinID: XP_041724286
LinkDB
Position
39:11206381..11239182
AA seq 1271 aa
MSADGGGKPAKVGSVVEVIGKGQRGTVAYVGATLFATGKWVGVILDEPKGKNDGTVQGKR
YFQCDENCGIFVRQSQIQLVEDGSSATSPDTPESATAKFLPKQKDIPEIPKSVKQMPIAK
KFVTRRSTKWNTPGRLSSSSSLPSLLMAPRATGLSSSRSREDVSEGSLSSKGALGAPVVP
MPSGIPATPGAPPPVTPSKAEPPASKQEEESLRGQVKDLEEKLETLKMKRAEDKVKLKEL
EKHKIQLEQLQEWKTKMQEQQADLQKQLKEAKKDAREALEAKDRYMEEMSDTADAIEMAT
LDKEMAEERSESLQVEVESLKEKVEELTMDLEIIKHEVEEKGSDGAASSYHVKQLEEQNS
RLKDALVRMRDLSSSEKQEHVKLQKQMEKKNGELETLRTQKEKLQDEMKQAEATIDELKE
QVDAALGAEEMVETLTERNLDLEEKVRELRETVTDLEAINEMNDELQENSRETEMELREQ
LDLNGARVREAQKRVEAAQETVADYQQTINKYRELTASLQDANRELTSVQNANAEQVQQP
PAELFDFKIKFAETKAYAKAIEMELRKMEVGQANRQVSLLTSFMPDSFLRHGGDHDCILV
LLLIPRLICKAELISKQAQEKFDLNSNPVERTGTKMRGPPGEQLSFASGLVYSLTLLQAT
LHKYEQALNCCSVEVYKRMGTLYSEMSVHERSLDFFIDLLHKDQLDETVHVEPLTKAIKY
YQQLYSIHLAEQTEDCTVQLADHIKFIQSALDCMSAELVRLRAFLQPGQEGVALNILLKD
LDTTCSDIKQFCKKIRRRMPGTDVPGVPAALAFGAPVSETLTDCRRQLTRVVAVLQEVAA
AGAQMVAPLGEQEGLNALKLDDVAFKAVEQVYGSQGLNPHECLRQSCSSVISTMNKMATA
MQEGEYDAERPQGKAPPVEARAAALRAEITDAEGLGVKLEDRDTVIKELKKSLKIKGEEL
SEAHVRLSLLEKKLDTSTKDADERVEKIQTKLDETLALLKKKEKEFEETMDALQADIDQL
EAEKAELKQRLSSQSKMTIEGLRAPPASGIASIVTGSAGAGVVPGAGGLSGPMQVVDSPL
LRQQVAAQRLGIKHLKNENNRLKAEKMRAQLASLPPLHVPKLHLREATSSSSPPTEGPLH
GALYRKTDQLLGTLLKMTATVKVVDITGKTPVSASAQLLDQTARLQSLSDALDKLKGEVS
EHVVSQQPGAKVSSDFATFPISSFVKAKEEKQGGTVFVGRVAIPCAKGQEQVHRLVLSQQ
HLQQVHRLLLT
NT seq 3816 nt   +upstreamnt  +downstreamnt
atgagtgcagacgggggaggcaagcctgccaaagtgggctcggtggtggaggtgatcggt
aagggccagcgtggcactgtggcatatgtgggcgctacgctctttgccacgggcaagtgg
gtgggtgtgatcctggacgagcccaagggcaagaatgacggcacggtccaggggaagaga
tacttccagtgtgatgaaaactgcggcatctttgtgcgccagtcccagatccagctagtg
gaagatggatccagtgccacctctccagacaccccagagtctgccactgccaagttcctg
cccaagcagaaagacattcctgagattccaaaatcagtcaaacagatgcccattgccaag
aagttcgtcacccgtcgtagcaccaagtggaacactccaggtcgcctctcctcctccagc
tcccttccctccctcctcatggctccccgggccaccggcctgtccagctctcggtccagg
gaggatgtcagcgagggcagcctgtcttccaagggtgcgctgggggctcccgttgtcccc
atgcccagcggcatccccgccacgcccggcgctccaccccccgtcacccctagcaaggct
gagcctcctgcatcaaagcaggaggaggagtctctgcgtggccaggtgaaggacctagag
gagaagctggagaccctgaaaatgaagcgggcggaggacaaggtcaagctgaaggagctg
gagaaacacaagatccagctggagcagctgcaggagtggaagaccaagatgcaggagcag
caggccgacctgcagaaacaactcaaagaggccaagaaggatgcccgggaggctttggag
gcgaaagaccgctacatggaggagatgtcagacacggcggacgccatcgagatggccacc
ctggacaaggagatggcagaggagcggtctgaaagcctgcaggtggaggtggagtcgctg
aaggagaaggtggaggaactcactatggacctggagatcattaaacacgaggttgaggag
aaagggtctgacggagctgcctctagttaccacgtcaagcagctggaggagcagaacagc
aggctgaaagatgctctggtcaggatgcgtgacctgtcgtcgtctgagaagcaggagcac
gtgaagctgcagaagcagatggagaagaagaatggagagctggagactctgaggacccag
aaggagaaactacaggatgagatgaagcaggctgaggccaccatcgatgagctgaaggag
caggtggatgctgctctcggggcagaggagatggtagagactctaactgagaggaatctg
gacctagaggagaaagtcagagagctgagagagacagtcactgacctggaagcgatcaat
gagatgaatgacgagcttcaggagaacagccgagagacagagatggagctgagagagcag
ttggacctgaacggagccagggtgagagaggcacagaagagagtggaggctgctcaggag
actgtagcagactaccagcagaccatcaacaagtaccgcgagctcaccgccagcctgcag
gatgccaacagggagctgaccagtgttcagaatgccaacgcagagcaggtccagcagcct
cctgctgagctgtttgacttcaagatcaagttcgctgagactaaggcctacgccaaggcc
atagagatggagctgaggaagatggaagtgggccaggccaacagacaggtgtctctcctc
acctccttcatgcccgactccttcctgcgtcacggaggagaccatgactgtatcctggtg
ctgctgctcataccaagactcatctgcaaggctgagttgatcagtaagcaggcccaggag
aagtttgatttgaacagtaaccctgtggagaggactgggacgaaaatgagaggaccacct
ggagaacaactcagcttcgcctcaggactggtctactctctgaccctgctgcaggccacg
ctgcacaaatacgaacaagctctgaactgctgcagtgtggaggtgtataagcgaatgggg
actctctactccgagatgagtgtccatgagcgttccctagacttcttcattgacctgctg
cacaaagaccaactggacgagactgtacacgtggagcctctcaccaaggccatcaagtac
taccagcaactgtacagcatccacctggctgagcagactgaagactgcaccgtgcagctg
gctgaccacatcaagttcatccagagtgcgttggactgtatgagtgctgagctggtgcgt
ctcagggctttcctgcagccgggacaggagggggtggctctgaacatccttctgaaggac
ctggacaccacctgcagtgacatcaaacaattctgtaagaagatcagacgcaggatgcca
gggaccgatgtgccaggggtgccagctgctctggcctttggagctccggtgtcggagacg
ctgacggactgcaggcgtcagctgacgcgggtggttgcagtactacaggaggtggcggcg
gcgggggctcagatggtcgcccctctcggggagcaggaggggctcaacgctctaaaactg
gatgacgtggccttcaaggctgttgaacaggtgtatgggtcccaaggtctaaacccccat
gagtgtctgcgtcagtcctgcagctctgtcatctccaccatgaacaagatggccactgcc
atgcaggagggagagtatgatgctgagagaccacagggaaaggctcccccagtagaggct
cgtgcggcagccctcagggcagagatcactgatgcagagggcctgggtgtcaaactggaa
gacagagacaccgtcatcaaggagctcaagaagtcactaaagatcaagggagaggagttg
agtgaggcccacgtccgtctcagtctcctggagaagaagctggacacgtcaactaaagac
gcagacgaacgtgtggagaagatccagaccaaactggatgagaccctggccctgctcaag
aagaaggagaaggagtttgaggagaccatggatgccctgcaggcagacattgaccagctg
gaggcagagaaggcggaactgaagcagcgtctctccagccaatcaaagatgaccatcgag
ggcctcagggccccgcctgcctcgggcatcgcctccatcgtcacgggatctgccggagcc
ggtgttgtcccaggagcagggggtctgtctgggccgatgcaggtggtggactcccctctc
ctccgtcagcaggtggcggctcagagactgggcatcaaacacctgaagaacgagaacaac
agactcaaggcagagaagatgagagcccagctagcctctctccctcccctccacgtcccc
aagctacacctgagagaggccacctcttcctcctctccccctactgaggggcctctccac
ggggctctctacaggaagactgaccagctcttggggaccctgctcaagatgaccgccacc
gttaaagtggtcgacatcaccgggaagacaccagtgagtgctagtgctcagctcttggac
cagacagctcggctgcagagcctgagtgacgccctggacaaactgaagggtgaagtgtca
gagcatgtggtttctcagcagcctggggcaaaggtctcctctgactttgccacctttccc
atctcgtctttcgtcaaggcgaaggaggagaagcagggaggcacggttttcgtagggcgc
gttgccatcccgtgtgccaagggccaggagcaggtgcaccgtcttgtcctctcacagcaa
cacctgcagcaagtgcaccgcctcctcttaacctaa

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