Coregonus clupeaformis (lake whitefish): 121554682
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Entry
121554682 CDS
T08357
Name
(RefSeq) somatostatin receptor type 1
KO
K04217
somatostatin receptor 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04080
Neuroactive ligand-receptor interaction
cclu04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121554682
04081 Hormone signaling
121554682
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
cclu04030
]
121554682
G protein-coupled receptors [BR:
cclu04030
]
Rhodopsin family
Peptide
Somatostatin
121554682
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GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
7TM_GPCR_Srv
7TM_GPCR_Srx
V1R
Motif
Other DBs
NCBI-GeneID:
121554682
NCBI-ProteinID:
XP_041724294
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Position
19:2514970..2532703
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AA seq
371 aa
AA seq
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MENMATNMTGDYPAYPTGLPYNSSIDYEDYDQELDASNIIIPSIYALVCCVGLTGNAMVI
YVILKYAKMKTATNIYILNLAIADELFMLSVPFLATSAAVRHWPFGSLMCRLVLSVDGIN
MFTSIFCLTVLSVDRYVAVVHPIKAARYRRPTVAKMVNVCVWGLSLLVILPIIIFADTVP
AQDGGVDCNFLWPEAAWSVAFVVYTFLLGFLLPVGAICLCYCLMVARMRAVGLKAGWLQR
RRSEKKITRMVLCVVAVFVLCWMPFYIVQLVSVFHHPPDAMVTQLFVILSYANSGANPIL
YGFVSDNFRRSFQRIVCFRWLESGLDGEQVDYRAVALKRQATNGQKDFPKDGLASDMVFR
NGTCTSRTTTL
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacatggccaccaacatgaccggtgactacccagcataccccaccggcctcccc
tacaactccagcatagactatgaggattacgaccaggaactcgatgccagtaatatcatc
atcccctccatctacgccctggtctgctgtgtgggtcttacaggcaatgccatggtcatc
tatgtgatcctcaaatacgccaagatgaaaactgccaccaatatttatatattaaatctg
gcaattgcagatgaactgtttatgttgagtgttccgttcttggcaacatcggcggctgta
cgtcattggccgttcggctcgctcatgtgccgtctggtgttgagcgtggacggcataaac
atgtttacatctatcttctgtctgacggtgttgagcgtggatcgatatgtggccgtggtt
caccctatcaaggctgcccgctaccgccgtcccaccgtggcaaagatggtcaacgtctgt
gtgtggggcctctcgctcctcgtcatcctccccatcatcatcttcgctgacacagtcccg
gcacaggatggcggcgtggactgcaacttcctgtggcctgaggctgcatggtcagtggca
tttgtggtgtacaccttcctgctcggcttcctgctgcctgtaggtgctatctgcctctgc
tactgcctgatggtggcacgcatgcgggcggtagggctcaaagccggttggctgcagcgg
aggcgctcggagaaaaagatcacgcggatggtgttgtgcgttgtggcggtcttcgtgctc
tgctggatgcccttctacatcgtccagctggtcagcgtgttccaccacccccccgacgcc
atggtcacccagctcttcgtcatcctgagttacgccaacagcggcgccaaccccatcctc
tatggcttcgtgtccgataacttccgccggtcgttccagaggatcgtgtgtttccgttgg
ttagagtctgggctggatggggaacaggtggactaccgtgctgtagctctgaagagacag
gccaccaatggacaaaaagacttccctaaggacggtctggcatctgatatggtgttccgg
aatgggacatgcacctcacgcactactacactgtaa
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