Coregonus clupeaformis (lake whitefish): 121554828
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Entry
121554828 CDS
T08357
Name
(RefSeq) zinc finger BED domain-containing protein 4
KO
K24640
zinc finger BED domain-containing protein 4
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121554828
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
121554828
BRITE hierarchy
Motif
Pfam:
zf-BED
Dimer_Tnp_hAT
zf-C2H2_12
Motif
Other DBs
NCBI-GeneID:
121554828
NCBI-ProteinID:
XP_041724446
LinkDB
All DBs
Position
40:34405455..34412336
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AA seq
1278 aa
AA seq
DB search
MDGEEDLSLKSEEDVVDSETNGIENKKREAKGTCLKIEGQDGYVFKSYSITPHDTADTKT
SCPSKTLAKDSSPVASIHEEEPDNLSISQVDGQLTINESVNEADEACDKEDSLRPTSPAI
SNKSLHLNTEVKIENDTSEHIEEEEDPNSMEEGTQEDERLSYDSSVGPFVTRDNTDDYSS
MLSGYTSTLYDVAMDAVTQSLLSSMRSPANANPRKKSPAWNHFCISPRDSTKAICMYCMK
EFSRGKNEKDLSTSCLMRHVRRAHPTVLLQDGDLSSNTLTASVASSVIPPSNSSNNGSLA
ASITTPDSQNNSSPSTSPAEGSDISSSKEVLPKLEPKLEKGAKNDTGTVSSSHSNNNHKK
VMDGGGCERLTASPKNSSSRRRSAVWKHFYLSPADSSKAVCIHCMNEFSRGKNGKDLGTS
CLIRHMWRAHREIVMEENGQGSNIPPPYTNPPTLLSRSQLHQDSVVNIKKESPFAPSSPE
TISDEVPHNEDESMDVKEESDDTINQSEQDSSLNLCFGFRDEDVPLPSSPCDLSLEGSGL
KEDLASSIFQQNKKIMKRVKSEVWHHFIVSPVDQLKALCRYCPCVISRGKRGDFGTSCLM
RHLMRRHPDVLKNQKITNDKDSSPHPYATLSAAEAVPAKLTNSPAKEKKPHNSVFSKKTS
KLWNHFSISPSDPTKVVCLHCSRTISRGKKTTNLGTSCLFRHMQRFHGNVLESNSTISGD
VPSAEIHVKHELMDTSSVYDENCERFDEYHPVAKKITKLVAEMLALDLQPSALVENTGLN
RLLEYLQPQYSLPSSSYFTSTAIPDMYERVKEVVLTHLKEAESGIVHFTTSIWVTSQTRE
YLTLTAHWVSYESCVRPQGEDFHCSALLSVSQIDCDHDMLNIQKQLEYFWDTWISSLGLK
KGFTVTDNNAIANVLEDNDHVIMQCFGHTIDLIVSEAIKSQRMVQNLLSIARKICERVYR
SDKAKEKLAELQKVYQLPENGLIQDVPSKWRTSFFMLERLVEQKKAVDEMSIECNFREMI
SCDQWEVMQSVCNALKPFEVACREMSNRTATLGQVIPLIHILNRKIDMLFDETMGIDNML
KSLKEAMVSRMSSTLHDPRYTWATMLDPRYKTSLFTEEQAEQCKQDLISELQVSHSTSIE
TKPSLSNGCGGEVPASSNGSPSNNKDNLWALMDDIRHKIKQEDKPKSSELAVLEYLEEDI
LDQSCDPLDYWNLKKLLWPDLAKVAVRYVGCPPSIVPAEILFSTASVNCALNQPMPLLEN
MEGLLFLKVNLPLIYYQH
NT seq
3837 nt
NT seq
+upstream
nt +downstream
nt
atggatggagaggaagacctctctcttaagagtgaagaagatgtagtagactcagaaact
aatggcatagaaaacaagaaaagagaggcaaaaggaacatgtctaaaaattgaggggcaa
gatggctacgtgtttaaatcatacagcatcaccccccatgacactgcagacacaaaaacc
tcttgtccgtctaaaacactggctaaagactcttcccctgtggcttctattcacgaggag
gaaccagacaacttatctatttctcaggttgatggacaattaacaattaatgagtctgtc
aatgaagcagatgaggcatgtgacaaagaggactctcttaggcctacttctccagccatt
tcaaacaaaagcctacatctaaacactgaggtcaagatagaaaatgacacatctgaacat
attgaggaagaggaggatccaaacagtatggaggaggggacccaagaggatgaaaggtta
tcgtatgatagttctgtaggcccctttgttactagagacaatacagatgattacagtagt
atgcttagtgggtacacaagcactctttatgatgttgcgatggatgctgtcactcaaagc
ctattgtcatccatgagaagtcccgctaacgctaatcccaggaagaaatcccctgcctgg
aaccatttctgcatatctccacgcgatagtaccaaagcaatctgtatgtactgtatgaaa
gagttcagtcgaggtaagaacgagaaggacctcagtacaagttgtttaatgaggcacgta
cgaagggctcaccccactgtgcttttacaagatggcgacctctcctcaaatactctgact
gcttctgttgcctcatctgtaatacccccctcaaattcatcaaataatggaagcctggca
gctagcattactactcccgattcacaaaataactcttcaccgtccacctctccagcagag
ggctctgacatatcatcatccaaagaagtgttaccaaaactcgaaccaaaactagaaaag
ggtgccaaaaacgacactggcacagtctcatcctcacattccaacaacaaccataaaaaa
gtgatggatggaggtgggtgtgagcgcctcactgcaagtcccaaaaactcaagttctcgt
agaagatcagctgtgtggaagcatttctacctgtcacctgctgacagttccaaagcagta
tgcatacactgcatgaatgaatttagcaggggtaaaaatggaaaggacttgggcactagc
tgtctgattcgccatatgtggagagcccacagagaaattgtcatggaagaaaatggacag
ggctcgaacatcccaccaccatatacaaacccaccaacactattgtctcgctctcagctg
catcaggactcagtagtgaacattaaaaaagaatccccctttgctccatcctccccagaa
acaatatctgacgaagtgccccataacgaagatgaaagcatggatgtgaaggaggagtct
gatgacacaataaaccaatcagaacaggattcctccctcaatctctgctttggattccga
gatgaggatgttcctttaccttcctcaccgtgcgatctgtccctagagggctcaggcctg
aaagaggatctggcgagttcaattttccaacaaaacaaaaaaatcatgaaacgggtgaaa
tccgaagtgtggcaccatttcatcgtctctccagtggatcagcttaaagccctctgccga
tactgcccctgtgtcatcagccgggggaaacggggtgactttggaaccagctgtttgatg
aggcatctaatgagaaggcaccctgatgtcctcaaaaaccaaaaaatcacaaatgataag
gactcctcacctcatccctacgctactctctctgccgctgaggctgttccagccaaacta
actaacagccctgccaaagagaaaaagccacataactctgtgttcagtaaaaagacatca
aagttgtggaatcatttttctatttccccttccgatcccactaaggtggtttgcttgcac
tgtagccgcacaataagtcggggcaaaaagacgacaaaccttggaactagttgtttattc
aggcacatgcagagatttcatggaaatgttcttgaaagtaacagtactatctcaggtgat
gtgccgtctgctgaaattcacgttaaacatgaactcatggacacttcttctgtgtatgac
gaaaactgtgaaagatttgatgaataccacccggttgccaaaaaaatcaccaaactcgtt
gctgaaatgcttgcactggatcttcagccatcagccctagtagagaacacaggtttgaac
cgattactggagtaccttcaacctcagtattctctaccctcctcttcgtatttcaccagc
actgccataccagacatgtatgagagggtgaaggaggttgttctcacacacctgaaagag
gctgagagtggtatcgttcatttcacaacaagcatctgggtcactagccagactcgggaa
tatctgactcttactgcccactgggtttcatacgaatcatgtgttagacctcagggcgag
gactttcactgctccgctctcctcagtgtgtcacagatagactgtgaccatgacatgcta
aatatacagaagcagctcgaatacttctgggacacctggatcagctccttagggctgaag
aaaggattcactgtaaccgacaacaatgccattgcaaatgtcctggaggacaacgaccat
gtcatcatgcagtgctttggacacaccatagacctaattgtgagcgaagccataaagagt
cagaggatggtccagaaccttctaagcatcgctcggaagatctgcgagcgcgtgtatcgc
tcagacaaagcaaaggagaagttggccgaactgcagaaggtttaccagctacctgaaaat
ggcctcatccaggacgttccctcaaaatggaggacatccttcttcatgcttgaacgtctg
gtggaacaaaagaaagcggtcgacgagatgtcgatagagtgcaacttcagggaaatgatc
agttgcgatcagtgggaagtgatgcagtcggtgtgcaatgcattgaagcccttcgaagtg
gcctgcagggagatgagcaatcgcaccgccactctgggtcaagtcataccactgatacac
atcctcaaccggaagatagacatgctcttcgacgagacaatgggcattgacaacatgctc
aagtctctgaaggaagcgatggtgagcaggatgtcgtcgaccctacacgaccccaggtac
acttgggcgacaatgctggacccgcggtacaagacttccttgttcacagaggaacaggcg
gagcaatgcaaacaagacctcatcagtgaacttcaggtgtcccattctacctcaattgag
acaaagccttcactatccaacggatgtggtggagaggtcccagcttcatcaaacggctct
ccctcaaacaacaaggacaacctctgggcgctcatggatgacatcagacacaagataaaa
caggaggacaagccaaaatcatcagagctggcagtgctggaatacttggaggaggacata
cttgatcaaagctgtgatccactggactattggaacctgaagaagttactgtggcctgac
cttgccaaggtcgctgtccgctatgtgggctgccctcccagcattgtcccagcagagatt
ctgttcagcacagccagtgtgaattgcgctctgaatcagcccatgccattactagaaaac
atggaggggcttctctttctaaaggtcaacctacccttaatttattatcagcactga
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