Coregonus clupeaformis (lake whitefish): 121554837
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Entry
121554837 CDS
T08357
Name
(RefSeq) signal transducing adapter molecule 2-like
KO
K04705
signal transducing adaptor molecule
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121554837
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121554837
Membrane trafficking [BR:
cclu04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-0 complex
121554837
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
VHS
SH3_1
SH3_9
SH3_2
UIM
GAT
SH3_10
USP_UIM_N
UIM_2
Motif
Other DBs
NCBI-GeneID:
121554837
NCBI-ProteinID:
XP_041724454
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All DBs
Position
40:18429248..18446764
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AA seq
509 aa
AA seq
DB search
MPLFAQNPFDQDVEKATNETNTVEDWALIMDICDRVGQTPNGAKDCLRSVMKRVNHKVPH
VAMQALTLLAACVNNSGRIFHLEICSREFATDVRTVLSRAHPKVCDKMKGMMVEWCDGFQ
KDPQLSLISATIKSLREEGVVFPSSGSQGSSLKGTTPAVSKPSDNDDLAKAIELSLQEQK
QCAETRPLTVTADPPFNTNGGGSSRDSRKVRALYDFEAAEDNELTFKTGELILVLDDSDP
NWWKGENHRGVGLFPSNFVTTNLNAEPELVTYVEKTPAPEEPSIEANVEPEPVFIDEEKM
DRALYLLQNTDPADAAPDCQELVQLEGACEQMNPMIDDKLEDIDRQHSELSELNVKVLEA
LELYNKLMNEAPFYTAYSKLQSQQQPQQHQYTPASQVPMQGYPGQPGGSYMPPGMPQGPP
AQQAYMGSDQPGPLHSLPPNVTSPNSQPSQLPYSVPYAPAGYPPQMGVAPQMDMSAYQNA
NLPPASYQMAAPLQQAPQQQQAYYQQPLL
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgcctttatttgcgcagaatccattcgaccaagatgttgagaaagccaccaatgaaacc
aatacagtggaggactgggccctgattatggatatctgtgacagagttggacagacaccc
aatggagccaaggactgcctgaggtctgtgatgaagcgagtcaaccacaaggtcccacac
gtcgccatgcaggccctcaccttgctggctgcctgtgtcaataacagtggaagaatattt
cacttagaaatctgctcgcgggagtttgccactgacgtccgaactgtgttgagcagggcc
caccccaaggtgtgtgacaagatgaaggggatgatggtggagtggtgtgatgggttccag
aaagatccacagctcagtctgatcagtgccaccatcaagtctctgagagaggaaggggtt
gtctttccatcctctgggtcacaggggtccagcctaaagggcaccactcctgctgttagt
aaaccatctgacaatgacgacctggccaaagccatcgagctgtccctgcaggagcagaag
cagtgtgcggagacacgacccctcaccgtgaccgccgacccccccttcaacactaacggg
ggcggcagtagcagggactcccggaaggtgcgggcgctctacgactttgaggcggccgag
gacaacgagctcaccttcaagaccggggagctcattctcgtcctggacgacagtgaccca
aactggtggaaaggagagaaccacagaggagtaggtctcttcccgtccaacttcgtcacg
accaacctcaatgctgagcctgaactagtaacgtatgtggagaagacgccagccccggag
gagcccagcatagaagccaatgtagagcctgagcctgtcttcatagatgaggaaaagatg
gatagagcgctctatcttctccagaatacagaccctgctgatgcagcacctgactgccaa
gaactggtccagctggagggtgcttgtgagcagatgaatccaatgattgatgacaagctg
gaagacattgacaggcaacactctgagctatctgagctgaatgtgaaggtgctggaggcc
ttggaactctacaacaaactgatgaacgaggcaccattctacacagcctactccaaactg
cagtcccagcagcaaccacagcagcaccaatacacacctgcctcccaagtccccatgcag
ggttacccaggtcagcctggtggttcctacatgcctccagggatgccccagggcccccca
gcccagcaggcctacatgggctctgaccagcccggacccctccactcactcccccctaac
gtcacatctcccaacagtcagccatcacagcttccttacagtgtaccatatgcacctgcc
ggataccctccacagatgggtgtggccccacagatggacatgtcagcctaccagaatgcc
aacctgcctccagcctcctatcaaatggctgctccattgcagcaggccccacagcagcaa
caggcctactatcagcagcctctcctgtaa
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