Coregonus clupeaformis (lake whitefish): 121554850
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Entry
121554850 CDS
T08357
Name
(RefSeq) cadherin EGF LAG seven-pass G-type receptor 1-like
KO
K04600
cadherin EGF LAG seven-pass G-type receptor 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cclu01002
]
121554850
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
cclu04030
]
121554850
04515 Cell adhesion molecules [BR:
cclu04515
]
121554850
Peptidases and inhibitors [BR:
cclu01002
]
Mixed peptidases
Family P2
121554850
G protein-coupled receptors [BR:
cclu04030
]
Adhesion receptor family
Cadherin EGF LAG (CELSR)
121554850
Cell adhesion molecules [BR:
cclu04515
]
Cadherins
Major cadherins
121554850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
7tm_2
GAIN
Cadherin_CELSR2_9th
Laminin_G_2
Laminin_G_1
EGF
GPS
EGF_laminin
hEGF
EGF_TEN
Dicty_CAR
Fibulin_C
Cadherin_4
K319L-like_PKD
Frizzled
Motif
Other DBs
NCBI-GeneID:
121554850
NCBI-ProteinID:
XP_041724486
LinkDB
All DBs
Position
40:32541441..32679856
Genome browser
AA seq
3073 aa
AA seq
DB search
MELPMYWIWVCVLFNVPLLGCFELHLSETLQTGTVLANLSLGPGWTYKIDRTLTPKYIQN
FLQVEWQEGALRMYRKVDCVRLLRNPVPVYIRIGSLTSENFVLTHFNTFVHGQDCFIKYK
RKRIIGKPDIHINYLSKLESTSCLSAGNLLVNVTDLLPAFTRNTTFSASCTTGKDLRAVF
KHGNLLLDDDYCLGHGELSEVHLHCTLRALSDWRVRVSVRARLRLVTVVEGESHEQLSSS
HTIQIVPGKWNHRKRRNVNTPPQFQLPNYQVSVPENEPSGTRVITLKATDPDDGEAGRIE
YGMEALFDSRSNDFFVINPQTGAITTVQPLDREVKDTHVFKVMVTDNGSPQRSATSYLTV
TVSDTNDHGPVFEQTEYRVTIRENVEVGFEVMTIRATDGDAPSNANMVYKIVNSDGVNAG
FEIDPRHGLVRIRERPDRETMSQYQLIVEANDQGKDPEPRSATATVNISVEDENDNYPQF
SEKRYVVQIPENVAVNSKVTQVEATDKDEGNNAKVHYSIISGNVKGQFYIHSPTGVIDVI
NPLDYEMIREYNLRIKAQDGGRPPLINGTGMVVVQVVDVNDNAPMFVSTPFQATVLENVA
IGYSVIHIQAIDADSGDNARLEYRLTDTSAGFPFTINNSTGWITVAVELDRETTEFYTFG
MEARDCGIPVMSSSASVSITVLDVNDNIPTFTEKVYSLKINEDAVVGTSVLTVTAVDRDV
NSVVTYQISSGNTRNRFAITSQSGGGLITLALPLDYKQERQYILTVTASDGTRYDMAQVF
INVTDANTHRPVFQSANYQVMISEDRPMGSTVVVISATDEDTGENARITYIMEDNVPQFK
IDPDTGAITTQMEIDYEDQASYTLAIIARDNGIPQKSDTTYVEIIILDANDNTPQFLRDM
YQGTVFEDAPVYTSVLQISASDRDSGSNGRLSYTFQGGDDGEGDFFIEPYSGIIRTARKL
DRENVPVYTLKAFAVDKGIPPLKAAVDIQVSVLDINDNAPVFEKDELFIYVEENSPVGSV
VARISATDPDEGTNAQIMYQIVEGNIPEVFKLDIFKGDLTALTDLDYESRTEYVIVVQAT
SAPLVSRATVHIRLVDINDNDPVLQNFEIIFNNYVTNKSNSFPSGIIGKVPAHDPDVSDK
LHYSFESGNELNLLVLNADTGELKLSRDLDNNRPLEAPMTVSVSDGIHRVTALCTLRVTI
ITDDMLTNSITVRLENMSQERFLSPLLSLFLEGVAAVLSTSRQAVFVFNIQNDTDVRGAI
LNVTFSALQPGGPPGRYFPSEELQEHIYLNRTLLRLISSQQVLPFDDNICLREPCENYMK
CVSVLKFDSSPPFISSNTVLFRPIHPINGLRCRCPAGFTGDYCETEIDLCYSGPCRNNGK
CRSREGGYTCECQEDFTGEHCEVNARSGRCVPGVCKNGGKCVDLLVGGFMCQCPPGEYEK
PYCEMTTRSFPGQSFITFRGLRQRFHFTVSFMFATRERNALLLYNGRFNEKHDFIALEII
EEQIQLTFSAGEAKTVVHPFVPGGVSDGQWHSVQLHYYNRPNIGRLGIPHGPSGEKVAVV
AVDDCDIAMAVRFGNQISNYSCAAQGTQTGQKKSLDLTGPLLLGGVPNLPEDFPVRNRDF
VGCMRNLSIDSKPTDMASFIANNGTTAGCPAKRNFCTKDLCQNGGLCVNKWNTYSCDCPL
GYGGKTCEQVMPSPQHFDGQALVSWSDLDITIAVPWYMGLMFRTRQGTGTLMQANAGDFS
TVNLLISDQYVRFEVFLGSERVAVLSFPQVRVNDGEWHHVLVELKSVKDGKDIKYMALVS
LDYGLYKRSVEIGNELPGLRLRALYLGGLPGEGNHVHDGFTGCIQGVRMGETSTNVVNVN
MLQGFKIHVEEGCDLADPCDSNICPENSHCSDDWSTHTCVCDPGYFGRECVDACHLNPCE
HVSTCVRKPSSSHGYTCECGQNYYGQYCENKIEKPCPRGWWGNPMCGPCNCDISKGFNPD
CNKTSGECRCKDNYYRPKDEDTCYPCECFPLGAHSRTCDPHTGQCHCKAGVIGQQCNRCD
NPFAEVTATGCEVVYEGCPKAFDQGIWWPKTKFGRPAAMNCPKGSIGTAIRHCNDEKGWL
PPELFNCTTGSFSQLMKMNEEMHRNESRMDGERSKAIVRLLHNATNHTDSYYGNDVKTAF
QLLTRVLQYESQQTGFDLTATRDAEFNENLVRAGSAILDPGTRDHWEQIQRSEGGTAHLL
RHFEDYTNTLAQNMRKTYLKPFTIVTDNMIIVVDYLDTSVPEQASFPRFHEIQEYYPKDL
TSSVHFPQFNTRPQEVPNKVVEPSPSVEPSQTDAPEEDQTLSNKRRRHVEPAATLPVAVV
IVFRSLGQLLPERYDPDRRSLRLPNRPVINTPIVSTLVYSEGSPLPSPLDPPITLEYTLL
ETEERTKPVCVFWNHSIAIGGTGGWSSKGCELLHRNNTHISCQCNHMTSFAVLMDISKRE
HGDVLPLKIVTYTTVSASLVALLLTFILLALLRKLRSNLHSIHRNLVAALFFSELVFLIG
INQTDNPFVCTVIAILLHYFYMCTFAWMFVEGLHIYRMLTEVRNINHGHMRFYYAMGWGI
PAIITGLAVGLDPQGYGNPDFCWLSVHDTLIWSFAGPISVVVLVNIVIFVLAAKASCGRR
QRSFEKSGAIPALRMAFMLLLLISATWLLGLMAVNSDVMTFHYLFAIFSCLQGIFIFFFH
VIFNKEVRKNLKNVFTGKKALPDESSTTRGSLLTRSLNCNNTYTVDGPLYRSAIGESTVS
LESTVRSAKSHSSYLAYTRRGDSGQKPSMSSGTAKAGHTDLDGSLFHRNSTKGGDDSDSD
SELSVDEHSSSYASSHSSDSEDDDMDIKPKWNNERQPLHSTPKGPSIAPKVEAVSNHVKP
YWPKDATTASDSEDPGGAERLRVETKVNVELHQENKLNHVGEREETPQDRETPTRENGPP
SLPSNGPSNGPPSTHQPEPKKGILKNKITYPPPLTDKNMKNRLREKLSDYNPPTISSSIP
PPIIPPSKTPSVASNDGVRPVSVGNSNSVIIKPPIAPRPQLPQNGGVAMSMKAMTTNGGN
ESDSEKTRVSLPL
NT seq
9222 nt
NT seq
+upstream
nt +downstream
nt
atggaattaccgatgtattggatctgggtatgtgttctattcaatgtgcccttgctggga
tgtttcgagctacacctttcggagacgttacaaactgggaccgttttggcaaatttgtcc
ctggggcccggttggacttacaaaatcgacaggactttaactcctaaatacattcagaac
tttttacaagtggaatggcaagaaggagctctccgtatgtaccgaaaagtggattgtgtg
cgcttattgaggaacccggtgcctgtctatatcaggatagggtcgttgacgtctgaaaat
tttgttttgacacatttcaatacatttgtacacggacaggactgttttatcaaatacaag
agaaagaggataataggtaagcccgacattcacatcaattacctttccaaactggaatca
acttcctgcttatccgcaggtaatttgcttgtgaatgtaacagaccttttgcctgccttt
acgcgaaataccactttttctgcttcatgtactactgggaaagacttgagagcagtattt
aaacatggcaatctattgctggacgacgactactgtttgggtcacggagagctgagcgag
gtgcatttgcattgtacactgcgtgctctgagtgattggcgcgtccgcgtctccgtgcgc
gcgaggttgcggttggtgacagtggttgagggagagagccatgagcagttatcatcatca
cacaccatccagattgtgcctggcaaatggaaccaccgaaaacggagaaatgtgaacaca
cccccccagtttcagctccccaactaccaggtgtctgttcccgagaatgaaccatcaggg
acccgcgtcatcacactaaaggccactgatcctgatgatggagaggccggtagaatagag
tatggaatggaggccctctttgacagcagatccaacgacttttttgtaataaaccctcag
acaggtgctattacaacagtgcagcctttagacagggaggtcaaagacacacacgtcttc
aaagtaatggtaacagataacggctccccacagcgctcagccacgtcttacctcaccgtg
acggtcagcgacaccaatgaccacgggccggtgttcgaacagactgaataccgggtaacc
atacgggagaatgtagaagtgggctttgaggtcatgaccataagagccacagacggggac
gcaccctccaacgccaatatggtctataaaatagtcaacagcgacggagtgaacgctggt
tttgagatcgacccacgccacgggctggtgaggatcagagagcggcccgacagagagacc
atgtcccagtaccagctgatcgtggaagccaacgaccaggggaaagaccctgaaccccgg
agcgccacggccaccgtcaacatctctgtagaggacgagaacgacaactacccccagttc
agtgagaaacgttacgtggtccaaatccctgagaacgtggccgtcaactctaaagtcact
caggtcgaggccacggacaaagacgagggaaacaacgctaaggtccactacagcatcatc
agtggcaacgtaaagggacaattctacatccactctcccactggggtcatcgatgtcatt
aatcccctggattacgagatgattagggagtataatttacggattaaagctcaggatggc
ggcaggcctccgttgatcaatgggactgggatggtggtggtccaggtggttgacgtaaat
gataacgctcctatgttcgtcagcacgccgttccaagccactgtgctcgagaatgtggcc
attggctactcagtaatccacatccaggctatagacgctgattctggggataatgcccgt
ctggagtaccgtctcaccgacacctccgctggtttccccttcaccatcaacaacagcact
gggtggatcacggtcgccgtggagctcgacagggaaaccactgagttctataccttcggc
atggaagcaagggattgtgggatacctgtgatgtcatcctcggccagcgtgagcatcacg
gtcctagatgtgaacgacaacatcccgaccttcacagagaaggtgtattctctaaagatt
aatgaggatgctgtggtggggaccagtgtgttgacagtgacagccgtcgacagggatgta
aatagcgtcgtaacctatcagatctctagcggaaacaccaggaaccgttttgccatcacc
agtcagagtggaggcgggctcatcaccttggcattacccttagactacaaacaggagcgc
cagtacatcctgacggtgacggcctcggacggcacgcgttatgacatggcacaggtgttc
atcaacgtcacggacgccaatacgcaccgtcccgtgttccagagcgccaactaccaggtg
atgattagcgaggaccggcccatggggtccaccgtggtcgtcattagcgccaccgacgaa
gacacgggtgagaacgctcgcatcacgtacatcatggaggacaacgtcccccagtttaag
atcgaccccgacacgggcgccatcaccacccagatggagatagactacgaggaccaggcg
tcgtacacgctagccataatcgccagggacaacggcattcctcagaagtccgatacaacc
tatgtggagataataatcctggatgccaacgacaacacacctcagttcctacgggacatg
tatcaggggactgtattcgaggacgcacccgtttacaccagtgtgctccagatatctgcc
tccgacagggactccgggtccaacggtaggctgagctacaccttccagggtggagatgac
ggggagggggacttcttcatcgagccctactctggcatcatcagaacagccaggaagcta
gacagagagaacgtgcctgtgtataccctgaaggccttcgctgtggacaaggggattcct
cctctcaaagcagcggtggacatccaggtgtcggtgctggatattaacgacaatgcgccc
gtgttcgagaaggacgaactgtttatctacgtagaggagaacagtcccgtcggttccgtc
gtggctcggatcagcgccaccgacccagatgagggaaccaacgctcagatcatgtaccag
atcgtcgaggggaacattcctgaggtctttaagctggacatcttcaaaggcgacctcacc
gcccttacggacctcgactacgagtccagaaccgagtacgtcattgtggtccaggccacg
tccgctcccctcgtcagccgggccacagtccacatccgtttagtcgacatcaatgacaac
gacccggttctgcagaactttgagattatcttcaacaactatgtgaccaacaagtccaat
agtttcccctcagggatcatagggaaggtgcctgcccatgacccggacgtgtcggataaa
ctccactacagctttgagtcggggaatgagctgaacctactggtgctgaacgcagacacg
ggggaactaaagctcagcagagacctggataacaacagacctctagaggcccccatgact
gtctctgtctccgacgggatccatcgggtcacagccctgtgcaccctgcgtgtcaccata
atcacagacgacatgttgaccaacagcatcacggtacgcctggagaacatgtctcaggag
cgcttcctgtcccctctgctgtccctcttcctggagggtgtggcagccgtgctctccacc
agccgccaggccgtctttgtgttcaacatccagaacgacacagacgtgcgcggcgccatc
ctcaacgtgaccttctcggcgctgcagccagggggtcccccagggaggtacttcccctcc
gaggagctgcaggagcatatctacctgaaccgcaccttgctccgactaatatcatcacaa
caggtgcttcccttcgacgacaacatctgcctgagggagccgtgtgagaactacatgaag
tgtgtgtctgtgctgaagtttgacagctccccgcccttcatctcctccaacacggtgctg
ttccgtcccatccaccccatcaacggtctgcgctgccgctgtcctgcaggctttaccggg
gactactgcgagacggagatagacctctgctactcaggaccctgcaggaacaacgggaag
tgtcgcagccgagagggaggctatacatgcgagtgtcaggaagacttcactggtgagcac
tgtgaggtgaatgcccggtcagggcggtgtgtcccgggggtgtgtaagaatggggggaaa
tgtgtggacctgctggtgggggggttcatgtgccagtgtcccccgggagagtacgagaag
ccttactgtgagatgaccaccaggtcctttcctggtcagtctttcatcaccttcagagga
ctacgacagaggttccactttactgtctcattcatgtttgccaccagagagaggaatgcc
ctgctgctgtacaatgggagatttaacgagaaacacgactttatcgccttggagattatc
gaggaacagatccaactcaccttctccgcaggagaggctaagaccgtggtccatcccttt
gttcccggaggggtcagtgatggtcagtggcactctgtccaactgcactactacaacagg
cccaacattggtcgtctggggatcccccatggaccctcgggtgagaaggtggctgtggtt
gctgtggacgattgtgacatcgccatggcagttcgctttggcaaccagatcagcaattac
tcctgtgctgcccaaggcacccagaccggacagaaaaaatcattggacctgacaggaccg
ctgctgctgggtggtgttcccaacctgcctgaggacttccctgtgaggaacagagacttt
gtgggctgcatgaggaacctgagcatcgacagcaaacccaccgacatggccagcttcatc
gctaacaacggaaccactgcaggttgccctgccaagaggaacttctgtactaaggatttg
tgtcagaacggaggactgtgtgtcaacaagtggaacacctacagctgtgactgtcctctg
ggctacgggggcaagacctgcgaacaagtgatgccgtcaccacagcactttgacggccag
gccctggtgtcatggagtgatctcgacatcaccatcgctgtgccctggtacatgggcctg
atgttccggacgaggcagggcactggcacgctgatgcaggctaatgctggcgacttctct
actgtcaacctactgattagtgatcagtacgtgaggtttgaggtgtttctgggatctgag
cgggtagcggtgctgagcttccctcaagtcagggtgaacgatggggagtggcaccatgtc
ctcgtggagctgaagagcgtcaaagacggcaaggacatcaaatacatggccctggtgtca
ctggactacggactgtacaagaggtcagtggagataggtaatgagctgccaggtctgagg
ctgagggctctgtatctgggaggattaccaggagaggggaaccacgtccacgatggcttc
accggatgtatacagggtgtgcgtatgggtgagacctccacaaacgtggtcaatgtgaac
atgctgcagggctttaagattcatgtagaggagggctgtgacctggctgatccctgtgac
tctaacatctgccctgagaacagccactgcagcgatgactggagcacacacacctgcgtc
tgcgacccagggtactttgggagggagtgtgttgacgcgtgtcacctcaacccctgcgag
cacgtgtccacctgcgtccgcaagcctagctcctcccatggctacacctgcgagtgtgga
cagaactactacggacagtactgcgaaaacaagattgagaagccgtgtcctcggggctgg
tgggggaaccccatgtgtggcccctgcaactgtgacatcagcaaagggttcaaccctgac
tgtaacaagaccagcggagagtgtcgctgcaaggataactactaccggcccaaggatgag
gacacctgttacccctgtgagtgcttccctctaggggcccactcccgtacttgtgacccc
cacaccggacagtgccactgtaaagccggggtcatcggacaacagtgtaaccgctgtgac
aacccctttgctgaggtcaccgccaccggttgtgaagtggtatatgagggctgtcccaag
gccttcgaccaagggatctggtggcccaagaccaagtttggccgtcctgcagccatgaac
tgtcccaaaggatctatcggaactgctatccgccactgcaatgatgaaaagggctggctg
cctcctgaactcttcaactgtaccacaggctccttctcccagctcatgaagatgaatgag
gagatgcatcgtaacgagtccaggatggacggcgagcgctccaaagctatcgtccgcctg
ctccacaacgccaccaaccacacggacagttactacggcaacgatgtgaagacagcgttc
cagctgctgaccagggtcctccagtacgagagtcagcagaccggcttcgatctcacggcc
acgagagacgcagagttcaacgagaacctggtgagagcgggcagtgccatcctagaccct
ggcaccagagaccactgggagcagatccagcgctctgaggggggcaccgcccacctgctg
cgccactttgaggattacaccaacaccctggcacagaacatgaggaagacctacctcaaa
ccattcaccatcgtcactgacaatatgatcattgttgttgattacctggacacgtccgtc
cctgagcaggcctcattccctcgctttcatgagatccaggagtactaccccaaagacctc
acgtcctctgtccatttcccacagttcaacactaggccccaggaggtccccaacaaagta
gtcgagcctagccccagcgtcgagccctctcagaccgacgcccctgaagaggatcagacc
ctatccaataagagacgccgccatgtcgagcccgctgccaccctgcctgttgccgtggtg
atagtgtttaggtcgttgggtcagctcctccctgagcgatacgacccggaccgtaggagc
ctcaggctgcccaaccgtccagtgatcaacacccccatagtgagcacgttggtgtacagc
gagggttctcccctcccctctccccttgacccccccatcacactggagtacacactactg
gagacagaggagaggaccaaacctgtgtgtgtgttctggaatcactccatcgcgattggt
ggtacgggaggctggtcgtctaagggatgtgaactactgcacaggaacaacacacacatc
agctgtcagtgtaaccacatgaccagcttcgctgtgctcatggacatttccaagagagag
catggtgacgtgttacccctaaagatcgtgacctacaccacggtgtcagcctccctggtg
gccctgctcctcaccttcatcctgctggctctactcaggaagctacgctctaacctccac
agcatccacaggaacctggtggcggcactcttcttctccgagctcgtcttcctcatcggc
atcaaccagactgacaacccatttgtgtgtacggtgatcgccatcctgctccactacttc
tacatgtgtacgtttgcctggatgtttgtggagggcctccacatctaccgcatgctgacc
gaggtcaggaacatcaaccacggtcacatgaggttctactacgccatgggctggggcata
cctgcaatcatcacaggtctggcagtgggtcttgaccctcagggctatgggaacccagac
ttttgctggctctctgtccacgacaccctcatctggagcttcgcaggacccatctctgta
gtcgtcctggtcaacatcgtcatctttgtactggcagctaaggcatcctgtggacgcagg
cagaggtccttcgagaagtctggagccattcctgctctgaggatggccttcatgctccta
ttgctcatcagcgccacctggctgttgggcctcatggccgtcaacagtgatgtcatgacc
tttcactacctgttcgccatcttcagttgtctgcagggcatcttcatcttcttcttccat
gtgatctttaataaagaagtgaggaagaatctgaagaatgtctttactgggaagaaggct
ttaccggatgagtccagcactaccagaggatctctactcactcggtctctgaactgtaac
aacacgtacactgtggacggtcctctgtacaggtcagccattggggagtccactgtttct
ctggagagtaccgtcaggtcagccaaaagccacagcagctacctcgcttacacacgcagg
ggtgactctggtcagaaacccagtatgtcgtcggggacagctaaagcaggacacactgac
ctggacggatctctgttccacaggaacagcactaaaggaggagacgactcggactcggac
agtgagttgtctgtagatgaacacagctcgtcctatgcctcgtctcactcttctgacagc
gaagatgatgacatggacatcaagcccaagtggaacaatgagagacagcctctacacagt
acacctaaagggcccagcatcgcacccaaagtggaagcagtgtccaatcacgtgaagcct
tactggcccaaggatgcgacgacagccagtgacagcgaggatcctgggggtgcagaacgg
ctgagggtggagaccaaggtgaacgtggagctgcaccaggagaacaaactcaaccatgta
ggagagagagaagagacaccccaggacagggagacccccactagggagaatggacctccc
agtctaccctccaatggaccctccaatgggcctcccagcacccaccagcctgagccgaag
aagggcatcctgaagaacaagatcacgtaccctcctcccttgaccgacaagaacatgaag
aaccgactgagagagaagctgagtgactacaaccctcccaccatctcctcctccatccct
ccccccatcatccctccatccaagaccccctcggtggcctccaacgacggggtgcgcccc
gtatctgtgggcaacagcaacagcgtaatcatcaagccgccgatcgccccacgcccacaa
ttaccacagaatgggggcgtggctatgagcatgaaggcgatgacgaccaacggaggcaac
gaatcagactcagagaaaaccagagtctctctgcccttatga
DBGET
integrated database retrieval system
