Coregonus clupeaformis (lake whitefish): 121554860
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Entry
121554860 CDS
T08357
Name
(RefSeq) tubulin alpha chain
KO
K07374
tubulin alpha
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04145
Phagosome
cclu04210
Apoptosis
cclu04517
IgSF CAM signaling
cclu04530
Tight junction
cclu04540
Gap junction
cclu04814
Motor proteins
cclu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
121554860
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
121554860
09143 Cell growth and death
04210 Apoptosis
121554860
09144 Cellular community - eukaryotes
04530 Tight junction
121554860
04540 Gap junction
121554860
09142 Cell motility
04814 Motor proteins
121554860
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
121554860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cclu03019
]
121554860
03036 Chromosome and associated proteins [BR:
cclu03036
]
121554860
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cclu04812
]
121554860
04147 Exosome [BR:
cclu04147
]
121554860
Messenger RNA biogenesis [BR:
cclu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
121554860
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
121554860
Cytoskeleton proteins [BR:
cclu04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
121554860
Exosome [BR:
cclu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121554860
Exosomal proteins of other body fluids (saliva and urine)
121554860
Exosomal proteins of colorectal cancer cells
121554860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
121554860
NCBI-ProteinID:
XP_041724504
LinkDB
All DBs
Position
Unknown
AA seq
450 aa
AA seq
DB search
MRECISVHVGQAGVQMGNTCWELYCLEHGIQPDGQMPSDKPTGNLDDSFTTFFSATGTGK
YVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNYARGHYTIGKEIIDSVLD
RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDFGKKSKLEFAIYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPSYTNLNRLISQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNVAIAAIKTKRSIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGIDSFEEEGEEGEEY
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgagtgtatctctgtgcatgtgggccaagccggagtccagatgggcaacacctgt
tgggagctgtactgcctggagcatgggatccagccggacggacagatgcccagcgataag
cccacaggtaacctcgacgactccttcactaccttcttcagcgccacgggcaccgggaag
tacgtgccccgcgccatcttcgtcgacctggagccaaccgttatcgatgaggtgaggacc
ggtacctatcgccagctgttccaccctgagcagctcatctcaggcaaggaggatgctgcc
aacaactacgcccgcggtcactacaccatcggcaaggagatcattgactccgtcctggac
aggatccgtaaactggctgaccaatgcactggtctccaagggttcctggttttccacagc
ttcggaggaggcaccggctctggtttcacctccctgctgatggaacgtctgtctgttgac
ttcggcaagaagtccaagctggagtttgccatctatccagctccccaggtgtccacagca
gtggtggagccctacaactccatcctgaccacccacaccaccctggagcactctgactgt
gccttcatggtggacaacgaggccatctatgacatctgccgtaggaacctcgacattgag
cgtccctcatacaccaatctcaaccggctgatcagtcagatcgtctcctccatcactgcc
tccctgcgcttcgatggagccctgaatgttgatctgacagagttccagaccaacttggtg
ccctacccccgtatccacttccctctggccacctatgccccagtcatctccgctgagaag
gcctatcatgagcagctgtcagtggctgagatcaccaacgcctgcttcgaaccagccaat
cagatggtgaagtgtgaccctcgtcacggcaaatacatggcctgctgcctcctgtaccgt
ggtgacgttgttcccaaagatgtcaatgtagcgatcgctgctatcaagaccaagaggagt
atccagtttgtggactggtgtcctactggctttaaggtggggatcaactaccagccccct
acggtggttcctggaggagacctggccaaagtccagagggctgtgtgcatgctgagcaac
accacagccatcgctgaggcctgggcccgtctggaccacaagtttgacctgatgtacgcc
aagcgagcatttgtgcactggtacgttggtgagggcatggaggagggagagttctcggag
gccagagaagacatggcagctctggagaaggattatgaagaggtgggtattgactcgttt
gaggaggagggggaagaaggagaggagtattaa
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