KEGG   Coregonus clupeaformis (lake whitefish): 121554860
Entry
121554860         CDS       T08357                                 
Name
(RefSeq) tubulin alpha chain
  KO
K07374  tubulin alpha
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu04145  Phagosome
cclu04210  Apoptosis
cclu04517  IgSF CAM signaling
cclu04530  Tight junction
cclu04540  Gap junction
cclu04814  Motor proteins
cclu05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    121554860
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    121554860
  09143 Cell growth and death
   04210 Apoptosis
    121554860
  09144 Cellular community - eukaryotes
   04530 Tight junction
    121554860
   04540 Gap junction
    121554860
  09142 Cell motility
   04814 Motor proteins
    121554860
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    121554860
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cclu03019]
    121554860
   03036 Chromosome and associated proteins [BR:cclu03036]
    121554860
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:cclu04812]
    121554860
   04147 Exosome [BR:cclu04147]
    121554860
Messenger RNA biogenesis [BR:cclu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     121554860
Chromosome and associated proteins [BR:cclu03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     121554860
Cytoskeleton proteins [BR:cclu04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    121554860
Exosome [BR:cclu04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   121554860
  Exosomal proteins of other body fluids (saliva and urine)
   121554860
  Exosomal proteins of colorectal cancer cells
   121554860
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3 DUF7281
Other DBs
NCBI-GeneID: 121554860
NCBI-ProteinID: XP_041724504
LinkDB
Position
Unknown
AA seq 450 aa
MRECISVHVGQAGVQMGNTCWELYCLEHGIQPDGQMPSDKPTGNLDDSFTTFFSATGTGK
YVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNYARGHYTIGKEIIDSVLD
RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDFGKKSKLEFAIYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPSYTNLNRLISQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNVAIAAIKTKRSIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGIDSFEEEGEEGEEY
NT seq 1353 nt   +upstreamnt  +downstreamnt
atgcgtgagtgtatctctgtgcatgtgggccaagccggagtccagatgggcaacacctgt
tgggagctgtactgcctggagcatgggatccagccggacggacagatgcccagcgataag
cccacaggtaacctcgacgactccttcactaccttcttcagcgccacgggcaccgggaag
tacgtgccccgcgccatcttcgtcgacctggagccaaccgttatcgatgaggtgaggacc
ggtacctatcgccagctgttccaccctgagcagctcatctcaggcaaggaggatgctgcc
aacaactacgcccgcggtcactacaccatcggcaaggagatcattgactccgtcctggac
aggatccgtaaactggctgaccaatgcactggtctccaagggttcctggttttccacagc
ttcggaggaggcaccggctctggtttcacctccctgctgatggaacgtctgtctgttgac
ttcggcaagaagtccaagctggagtttgccatctatccagctccccaggtgtccacagca
gtggtggagccctacaactccatcctgaccacccacaccaccctggagcactctgactgt
gccttcatggtggacaacgaggccatctatgacatctgccgtaggaacctcgacattgag
cgtccctcatacaccaatctcaaccggctgatcagtcagatcgtctcctccatcactgcc
tccctgcgcttcgatggagccctgaatgttgatctgacagagttccagaccaacttggtg
ccctacccccgtatccacttccctctggccacctatgccccagtcatctccgctgagaag
gcctatcatgagcagctgtcagtggctgagatcaccaacgcctgcttcgaaccagccaat
cagatggtgaagtgtgaccctcgtcacggcaaatacatggcctgctgcctcctgtaccgt
ggtgacgttgttcccaaagatgtcaatgtagcgatcgctgctatcaagaccaagaggagt
atccagtttgtggactggtgtcctactggctttaaggtggggatcaactaccagccccct
acggtggttcctggaggagacctggccaaagtccagagggctgtgtgcatgctgagcaac
accacagccatcgctgaggcctgggcccgtctggaccacaagtttgacctgatgtacgcc
aagcgagcatttgtgcactggtacgttggtgagggcatggaggagggagagttctcggag
gccagagaagacatggcagctctggagaaggattatgaagaggtgggtattgactcgttt
gaggaggagggggaagaaggagaggagtattaa

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