Coregonus clupeaformis (lake whitefish): 121554923
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Entry
121554923 CDS
T08357
Name
(RefSeq) PTB domain-containing engulfment adapter protein 1 isoform X1
KO
K23285
PTB domain-containing engulfment adapter protein 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
121554923
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121554923
Membrane trafficking [BR:
cclu04131
]
Endocytosis
Phagocytosis
Others
121554923
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PID
PTB
PID_2
IRS
DivIC
HAP1_N
TSC22
APG6_N
Spc24
ACBP4_C
bZIP_1
CCDC113_CCDC96_CC
Ax_dynein_light
Herpes_BLRF2
DUF6262
Med4
CENP-F_leu_zip
bZIP_2
DUF7307
ABC_tran_CTD
Shugoshin_N
ZapB
Motif
Other DBs
NCBI-GeneID:
121554923
NCBI-ProteinID:
XP_041724565
LinkDB
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Position
4:24205701..24356049
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AA seq
407 aa
AA seq
DB search
MREYLFLGVKVEYWQIHRRDHKDTRFSSMNRAFNRKKDKSWMHTPEALAKHYVPYNAKFL
GNTEVDQPKGTEIVKDAVRKLKFQRHIKKSEGQKTPKVELQISIYGVKILDPKTKDAQYN
CQLHRISFCADDKTDKRIFTFICKDSESNKHLCYVFDSEKCAEEITLTIGQAFDLAYKKF
LESGGKDVETRKQIGTLQKRIQELETENSELKKQLSDLEEQLMIDPVPPLLHINSTNEAY
MLSRPSSLFWCHNLTSFSCLEISSVTLTPMSSPESNLSAGLLTPPPAKSALLPKTADGCS
IPRPRAGSISLKPQMSTDVFDMVPFSAVTPLVPIPASNGTHPPPPTTSPPGISKDLFGAA
PFDPFTCGQADFPPDIQSKLDEIQEGFKMGLTLEGTVFSLGPLDSRC
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgagagaatacttgttccttggggtcaaagtggagtattggcaaatacacagaagggac
cacaaagacacaaggttttccagtatgaaccgggcctttaacaggaaaaaagataaatcc
tggatgcacactccagaagcgctggcaaagcattacgtaccctacaatgccaagtttctt
ggaaacacagaagttgatcaaccgaaaggcacagagattgttaaagatgcagttagaaag
ttaaagtttcaaaggcatatcaagaagtcagagggacagaagaccccgaaagtggaattg
caaatctccatttatggagtaaagatcttagatcccaagacaaaagatgcccagtacaac
tgccagttgcataggatatccttctgtgcagatgacaagacggataaaaggatattcacc
ttcatttgtaaagactcagagtcaaacaaacacctctgctacgtgtttgacagtgaaaaa
tgtgcagaggagataacactcactattggccaggcgttcgacttggcctacaagaagttc
ctcgagtctggtggaaaagatgtggagacacggaaacagataggaaccttacagaaaaga
attcaagaactggaaactgaaaattcagagctaaagaagcagctttcggatctggaggag
cagttgatgattgatcctgtgccaccactgctgcacataaactctactaacgaggcctac
atgctctcaaggccctcctcgctcttctggtgtcacaatctgacgtccttctcgtgtctt
gagatctcctcggtcacactcacccctatgagctcaccagagtccaacctctcggcaggg
ctactaacccctcctccggctaaatccgctctccttccaaagactgccgacggatgcagc
atcccccggcctcgcgctggcagcatctccttgaaaccccagatgtccacagatgttttt
gacatggttcccttctctgctgtcacacccctggtaccaatacccgcaagcaacggcaca
cacccgccaccccctacaacatctcctccaggcataagtaaagacctttttggtgcagca
ccttttgatccgttcacctgtgggcaagctgacttccccccagatatccagtccaaactg
gacgagatacaggaggggttcaaaatgggactaaccctagagggcactgtcttttctctt
ggcccactagacagtcgctgctga
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