Coregonus clupeaformis (lake whitefish): 121554937
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Entry
121554937 CDS
T08357
Name
(RefSeq) solute carrier organic anion transporter family member 1C1
KO
K08747
solute carrier organic anion transporter family, member 1C
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
121554937
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cclu02000
]
121554937
Transporters [BR:
cclu02000
]
Solute carrier family (SLC)
SLC21/ASLCO: Organic anion transporter
121554937
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
OATP
MFS_1
Kazal_2
Kazal_1
Jiraiya
SBF
Motif
Other DBs
NCBI-GeneID:
121554937
NCBI-ProteinID:
XP_045068077
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All DBs
Position
40:complement(31971517..31991521)
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AA seq
732 aa
AA seq
DB search
MGDPAEDRGKLTSQQELCVPDKQATKRSCCSTLKLFIVALSFAYFSKALSGTYMKSAITQ
IERRFDLSSSLIGLIDGSFEMGNLLFLAVVSHFGAKLHRPRLIAMGCFLMAVGSFLTGLP
HFFMGRYTFDTVIQGSMNDSVSITPCLDLLKQTDIPEIQMEPSSDFNTDCVRDSSSHMWI
YVFLGNALRGIGESPVTPLGISYIDDFAKAENSAFYIACLQTITLLGPMFGFLLGSLCAR
LYVDIGYVDLETVTITPKDARWVGAWWLGFLVSSVIMLLSGIPFWFLPRSLPKQGEESKL
LPSTTTQDGAGNSDATPHQTMTLAVIAKGFIPSLKKLLSTPAYFLLLCGSILKFNSFIGL
LTFKAKYMEQQFGQSAARANFLIGVLNLPAVAVGIFLGGLLMKRYKLGVVSGAQLSFVTS
FMAYLLLLLQFGTKCDNVQVAGLTVSYNGTPGVVSDGSLLLSECNRDCSCLAGEWDPVCS
DNGITYTSPCLAGCSSSTGYGKNTVFHNCSCVLSSPAPGGSMSVTLGQCPRRRECSHSFT
SYMAVSVLSSFINSLGTTPGYMVIIRCIKPELKSLALGIQTLVMRTLGGIPAPLYFGALI
DTTCLRWGIKKCGGRGACRLYDSDMYRVIFLGLITCLSGSSYFFIIAVIVLLRIQFRREG
DTTTGQPPQSSLEIELQTPPKTTEPLNTPKEIKVHTPKEGEREGEAEEDNSLQTHKDTEE
EERGEMLGQTLC
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgggtgatccagcggaggacagagggaagctgaccagccaacaggaactgtgtgtccct
gacaagcaggccaccaaacgctcctgctgttccacactcaagctgttcatcgtggccctg
tcgttcgcctacttctccaaggctctgtcagggacctacatgaagagtgccatcacccag
atagagagacgctttgacctgtccagctctctcatcggactcatagacggaagctttgag
atgggtaacctgctgttcctggctgtggtcagccattttggggcaaagctgcaccggccc
agactcatcgctatgggctgtttcctcatggctgtaggatccttcctcacaggcctgcca
cacttcttcatgggacgctacacatttgacacagtcatccaaggctcaatgaatgacagt
gtcagtataactccatgtctggaccttctaaagcagacagacatcccagagatccagatg
gagccatcttctgacttcaacacagactgtgtgcgggactccagctcccacatgtggatc
tatgtgttcctggggaacgctctgagggggataggagagtcacccgtcaccccactaggt
atctcctacatcgacgacttcgctaaagctgaaaactctgctttttacattgcatgtcta
cagaccatcacactgctaggtcccatgtttggtttcctgctggggtcgttgtgtgccaga
ctctatgtagacattggatatgtcgatctggagactgtgaccatcactcccaaggatgcc
cggtgggtgggggcctggtggctgggtttcctggtctcctctgtcattatgctcctgtca
ggcatccccttctggttcctgccccgctcgctgcccaagcagggagaggagagcaagctg
ctccccagcaccactactcaggatggggcagggaacagcgacgccaccccacatcagacc
atgacgcttgctgtgattgcaaaaggtttcataccgtcactgaagaagctactgagcaca
ccagcgtactttctgcttctgtgtggcagcatcctgaagttcaactccttcattggcctg
ctcacattcaaagccaagtacatggaacagcagtttggccaatcagcagccagagccaac
ttcctcattggtgtgttgaacctgcctgctgttgctgtggggatattcctgggcggtcta
ctgatgaagaggtataagcttggcgttgtgtctggagctcagctgtctttcgtcacctcc
ttcatggcctacctcctcctccttctgcagtttggcactaagtgtgacaacgttcaggta
gctgggctgaccgtgtcctacaacgggacccctggtgtggtctctgatggcagcctgttg
ttgtcagagtgtaacagagactgctcctgtttggctggggagtgggaccctgtgtgttca
gacaacggcatcacctacacctccccctgcctcgcaggctgctccagctctacaggatac
ggcaagaacacggtattccacaactgcagctgtgtgttgtcctcccctgcaccggggggc
agtatgtcagtaacattaggccagtgtcctcgcagaagagagtgcagccacagcttcact
tcttacatggctgtgtccgtactcagctcctttatcaactcccttgggaccacacctgga
tacatggtcatcatacggtgcatcaagcccgagctaaaatccctggcgttaggtatacaa
actttggtgatgagaaccctagggggtattccagcaccattgtacttcggggctttgatt
gacacaacatgtttgaggtgggggatcaagaaatgcgggggcagaggtgcctgtcgattg
tatgactctgatatgtacagggtgatcttcctgggcctcatcacatgtcttagtggctcc
tcctactttttcatcattgcagtcattgttctgctgaggatacagtttaggagggagggg
gacaccaccacgggacagcccccacagtcatcgctagagatcgaacttcagactcccccc
aaaaccactgaacccctcaacacaccgaaagagattaaggtgcacacccccaaagaggga
gaaagagagggagaggcggaagaggataactccctccaaacacacaaagacacagaggag
gaggaacgtggggagatgctgggtcaaactctgtgttag
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