| Entry |
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| Name |
(RefSeq) LOW QUALITY PROTEIN: pseudouridylate synthase 7 homolog
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| KO |
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| Organism |
cclu Coregonus clupeaformis (lake whitefish)
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| Brite |
KEGG Orthology (KO) [BR:cclu00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:cclu03016]
121554940
Enzymes [BR:cclu01000]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
121554940
Transfer RNA biogenesis [BR:cclu03016]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
121554940
Prokaryotic type
121554940
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
40:complement(32523029..32524715)
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| AA seq |
408 aa
MEHTLYIVLYKENKDTMEAINVLSKFLRMRPNVFSYMGTKDKRAITVQEIAVLKVTAERL
SHLNKCLNNFKLGNLCYKKHPLKLGELQGNHFTVVIRNITGTEEQVQQAMTSLRETGFIN
YYGMQRFGTTAVPKHQVGKAILQDNWNXVIDLILKTRPGAEKGYLVKCREEWAQSQDPEA
ALKKLSVKHCVEGQLLRGLSMYVKKNIITAFAMIPRNNRLMYIHSYQSFMWNTMVSRRIE
AFGVKAVEGDLVLREGTAFVLSAAEAETHSIQDVMMPLPGFEVIYPTHHVGKGYREMRSA
DNLDIDNMRHRVRDYSLAGAYRRILIKPSDVSWEVINYEDPRVSLVHTDVEKLEDQPPPV
FNKEGKYRALRMEFSLPPSTYATMAIREVLKMDTSIKNQTQLNTTWLN |
|---|
| NT seq |
1227 nt +upstreamnt +downstreamnt
atggaacatacattatacatcgtcctctacaaggagaacaaagacaccatggaagccatc
aacgtgctctcgaaattcctcaggatgaggcccaatgtgttctcctacatggggaccaag
gacaagagagccatcactgtgcaggagattgcagttctcaaggtcacagcagaaagactg
tcacacctcaacaagtgcctcaataacttcaaactgggaaacttatgctacaagaaacac
cctctgaaactgggagaactacagggcaatcacttcactgtggtcatcaggaacatcaca
gggacagaggagcaggtccagcaggccatgacctcccttagagagacaggcttcatcaac
tactacggcatgcagcgctttggcaccaccgccgtgcccaaacaccaagttggcaaggcc
atcttgcaagacaactggaattaagtgatagatctgatcctgaagactcgccctggagcg
gagaaaggttacctggtgaagtgccgtgaggagtgggcccagtcccaggacccagaagca
gcgctgaagaagctgtctgttaaacactgtgtggagggacagctgctccgaggtctctcc
atgtacgtcaagaagaacatcatcactgcctttgcaatgatccctcgtaacaaccggctg
atgtacatccacagctaccagagctttatgtggaacaccatggtcagcagacgcattgag
gccttcggagtgaaggctgtggagggagacctcgttctcagggaaggcactgcattcgtg
ctgtccgcagccgaggccgagacccactctatccaagacgtgatgatgcccctaccaggg
tttgaagtcatctaccccactcaccatgtgggtaagggctacagggagatgcgtagtgca
gataacctggacattgacaacatgaggcacagggtgagggactactctctggccggagcc
taccgacgtatcctcatcaaacccagtgacgtcagctgggaggtgattaactatgaggac
cctcgtgtctccctggtccacactgatgtggagaaactagaggaccaacctcccccagtc
ttcaacaaagaggggaagtacagggctctgaggatggagttctccctgcctccctctacc
tacgccaccatggccatcagagaggtgctcaagatggacaccagcatcaagaaccagact
cagctcaacaccacctggctcaactaa |
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