Coregonus clupeaformis (lake whitefish): 121554958
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Entry
121554958 CDS
T08357
Name
(RefSeq) interferon-inducible double-stranded RNA-dependent protein kinase activator A homolog
KO
K24540
interferon-inducible double-stranded RNA-dependent protein kinase activator A
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cclu03036
]
121554958
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Gene silencing
microRNA pathway
RISC loading complex
121554958
BRITE hierarchy
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Ortholog
Paralog
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GFIT
Motif
Pfam:
dsrm
DND1_DSRM
Staufen_C
DSRM_2
Motif
Other DBs
NCBI-GeneID:
121554958
NCBI-ProteinID:
XP_041724608
LinkDB
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Position
40:complement(12822788..12828105)
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AA seq
306 aa
AA seq
DB search
MSQDEFQPTLIRTTHNNNTSLSIQQPQAPCPGKTPIQVLHEYGTKIGNPPVYVMEKAEGE
AHQPSFIFNVTIGDMSCTGQGSSKKAAKHQAAESVLNLLEIDTGTPLHIKKESNGIPEEP
NDQPNSVGKLQELALHRGWRLPEYTVFTEAGPPHKREFTVTCRMESLTETATGTSKKVAK
KAAAEKILAKLVSGCPEITWIPKPGVRLENLRNSSAEKMSLLRRNPLSIPNTDYIQMMLE
LSQEQGFEVTYFDIDELTVNGQYQCLAELSTSPVTVCHGTGISCGNAHNDAAHSALQYIK
IMASIK
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaagacgaatttcaacctacactaataagaaccacgcacaataacaacacgagc
ttgagtattcaacaaccacaggcaccgtgccctggtaaaacacccatacaagttctacat
gaatacggaaccaaaattggaaaccctcccgtgtacgtgatggaaaaggctgaaggggag
gcgcaccaacccagcttcatcttcaacgttacaataggagatatgtcctgcacaggtcaa
gggtccagtaaaaaagctgccaaacaccaggccgctgagtctgtcctgaaccttctggaa
atagacactggaacaccccttcacataaagaaggaaagtaacggcatcccggaagagccc
aacgaccaacccaactcagtggggaaactgcaggagctggccctgcatcggggatggcgc
ctccctgaatacactgttttcacagaggcaggcccacctcacaagagagagttcactgtg
acctgcagaatggagtcgctcacagagactgcaacgggaacttccaagaaagtggctaaa
aaggcagctgcagagaaaattttggcaaaacttgtgtctggctgtcctgaaatcacatgg
atcccaaagcccggtgtccgattggagaacttgcgtaactcctcagcagagaagatgtct
ctcctgagaaggaacccactcagtattcccaacacagactacatccagatgatgctggag
ctatcccaagagcagggctttgaagtcacatactttgacatcgatgagctgacagtgaac
gggcagtaccagtgcctggcagagctgtctacctcacccgtcaccgtatgccacggcacg
ggcatctcctgcggcaacgcacacaacgacgccgcacacagcgctctccagtacatcaag
atcatggcttccatcaaatga
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